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scnpilot_solids1_trim150_scaffold_48_137

Organism: SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(148620..149177)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Demetria terragena RepID=UPI00037AF8F9 similarity UNIREF
DB: UNIREF100
  • Identity: 81.5
  • Coverage: 184.0
  • Bit_score: 297
  • Evalue 9.30e-78
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 64.2
  • Coverage: 179.0
  • Bit_score: 226
  • Evalue 6.40e-57
Helix-turn-helix domain protein {ECO:0000313|EMBL:ABP53640.1}; TaxID=369723 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.2
  • Coverage: 179.0
  • Bit_score: 226
  • Evalue 2.80e-56

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Taxonomy

Salinispora tropica → Salinispora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGTCCGATCTCGAACAGATCGTCCGAACCCGACTGCGCAGTCTGCGCCGTGCGCAATCGCTGTCACTCGACGACCTGGCCGAACGATCCCATCTGAGCACCTCGACCATCAGCCGGATCGAGACCGGCAAGCGCTCGATCGGCCTGGACGTGCTCCTCCCCCTGGCGAGGGCGCTGCGGACCGACGTGGAGACCCTGCTCGAGGACGACGTGGACACCGACGTGGTGATCCGTCCCGTGCCCAGCCAGGAAGGCGCGCGCACCACCTGGGCGCTCTCCAAGGCGACAGGCCAGATGAAGGCTCTGAAAGTCCGCCTCGAGCCCAGCGGAATGATGCCCGAGCAGCGCGTGCACCCCGGCCACGATTGGTTCTTCGTGCTCGAGGGGCGGATCCGGCTCCTGCTCGGCGACCGCATGATCCTCGTCGAGGCGGGCGAGGCCGCCGAGTTCGCCACCATGACGCCGCATGCGTTCATCGCCGAGGGCGGCCCCGCCGAGGTGATCATGATCTTCGATCAGCAGGGGCTCGTCGTGCACCGAGACGGAGGCGCGGTCTGA
PROTEIN sequence
Length: 186
MSDLEQIVRTRLRSLRRAQSLSLDDLAERSHLSTSTISRIETGKRSIGLDVLLPLARALRTDVETLLEDDVDTDVVIRPVPSQEGARTTWALSKATGQMKALKVRLEPSGMMPEQRVHPGHDWFFVLEGRIRLLLGDRMILVEAGEAAEFATMTPHAFIAEGGPAEVIMIFDQQGLVVHRDGGAV*