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scnpilot_solids1_trim150_scaffold_51_25

Organism: SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(24874..27129)

Top 3 Functional Annotations

Value Algorithm Source
DEAD-box ATP-dependent RNA helicase CshA {ECO:0000313|EMBL:KJL26248.1}; EC=3.6.4.13 {ECO:0000313|EMBL:KJL26248.1};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.0
  • Coverage: 788.0
  • Bit_score: 921
  • Evalue 9.80e-265
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003467893 similarity UNIREF
DB: UNIREF100
  • Identity: 67.3
  • Coverage: 783.0
  • Bit_score: 907
  • Evalue 1.00e-260
  • rbh
superfamily II DNA and RNA helicase similarity KEGG
DB: KEGG
  • Identity: 62.2
  • Coverage: 764.0
  • Bit_score: 808
  • Evalue 1.60e-231
  • rbh

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Taxonomy

Microbacterium foliorum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2256
ATGCCGAAGAACGGCAAGCCCAAGGGCGGTCGTCCGTCCCGCAACTTCGAGCCGCGCTACGCGAAGAAGACGGCGTTCCACGACCGTCACGCAGGCGGTCGTCCTGGTCGCGACGAGAGGGCGGATGCCGGTGAGCGCCGCTCCTACTCGTCGGACGCTCGCAGCAGCGATCGTCGCCCCGGGAGCATCAGCCCCAAGCACCGCGGGTACCGCCCCGCCGAGGCGGGCTCCGCGCCCAAGCGCCGCTGGACAGAGTCCGAGCGCGCCGGTCGCGACGAGGCGCGGTCCATCCGGGGCCGCGCGGAGTCGGGTCGCCGCGAGGCTCCGCACCGCTCCGACGATCACGGCTTCGATGGCCGTCGTCGGTTCGAGGAGCGCGGTGAGCGCCGCTTCGGCGACGATCACCGTGGTGGCCGCGGCTTCGACCGCGCCGGCAACGGCCCGCGCGACAGCCGCTTCGGTCGTGAGGATCGTCAGCGCGGTGAGCGCTTCGGGCGCGACGAGCGCGGCGGGCGCGGATTCGAGCGCCGTGACGAGCGCCCGCGTTTCGACCGTGACGACCGGGGCGCCCGGGGGTTCGAGCGTCGCGATGACCGCAGCGGACGGAGCCACGAGCGCCGTGATGACCGCCCGCGTTTCGACCGTGACGACCGGGGCGCCCGGGGCGGCGTCGACAGGAGCGACCGCGGATCCCGCGGCTACGAGCGTCGCGATGATCGCTTCTCGCGGGGTGACCGCCCGCACTTCGAGCGTCGGGACGACCGCCGCGGCGGGGTCGACGGCTCTCGCGACCGCTTCGCGCGCAGCGATCGTCCGGCGTTCGACCGTTCGCACGGGCATCGCGACGACCGTTCGCAGAACCGCTTCTCGCGCGAGGACCGTCCGGGCTTCGAGTCTCGAGATGACCGTCGCGACCGTCCGCGTCGCGAGGACCGCCCCAGCCGCAGCGACTGGAACCGCACGGCCACCGTCAAGGCCCACGAGGAGCACGTCGATGTCGTTCACGAGCGCCTCGAGGCGCAGGCCGTGCAGGCCACCGAGGTCGCCGATGTGACCTTCTCCGATCTGGGGCTGGGCTCCAACATCGTCGAAGTGCTGCGCAACATGGGCGCCGAGACGCCGTTCCCGATCCAGGCCGCCACGATCCCCTCGATCCTCGAGGGGCGCGACGTGCTGGGCCGTGGTCGCACCGGCTCCGGCAAGACCATCGCCTTCGGCGCACCGCTGGTCGAGAGCATCCTGCTGTCGCAGAAGGGCAAGCGCCGCGAGATCGGCCGCAAGCCGCGTGCGCTCATCCTCGCGCCGACCCGCGAGCTGGCGCTGCAGATCGACCGCACCGTGCAGCCGATCGCACGCAGCGTGGGCCTGTTCACCACGCAGATCTACGGCGGCGTGCCGCAGGCCCGGCAGGTGGGCGCGCTGAAGAAGGGCGTCGACATCGTCATCGGCACGCCCGGCCGCATCGAGGACCTCATCGAGCAGCACAAGCTCGACCTGTCCGAGGTGCGCATCGCTGTGCTCGACGAAGCCGACCACATGGCAGAGCTCGGCTTCGCGGAGCCCGTGCAGCGCATCCTGCGCAAGACCGGCACAGACCTTCACGACGGCGAGACCAGTCAGAAGCTGCTGTTCTCGGCAACGCTCGACCGCGAGGTCGCCGCGATCGTCGACGAGTTCCTGGTGGACCCCGCCGTCTACGAGGTGGCCGGCGAGGACCAGGACCACAGCAGCATCGAGCACCGCGTGCTGGTGATCGAGCACCGCGACAAGGCCGAGGTGCTGAACCTGCTGGTCGACCGCGAGGGCCAGACGCTGGTGTTCGCCCGCACCCGCGCCTATGCGGAGATGCTGGCCGAGCAGTTCGAGGATGCCGGCATCCCCGCCGTCTCGCTGCACGGCGACCTGAACCAGGCCAAGCGCACGCGCAACCTGCAGAAGCTCACCTCGGGCAAGGTGCAGGTGCTGGTGGCGACGGATGTCGCCGCCCGCGGCATCCACGTGGACGACGTCGGACTGGTCGTGCAGGCCGACGCACCCGACGAGTACAAGACCTACCTGCACCGCTCCGGCCGCACCGGCCGCGCGGGGCACTCGGGTCGTGTCGTGACGCTGATCACACGCCAGCGCCGTCGCCGCATGGAGGAGCTGCTGTCGCGCGCCGAGATCCACGCACCGTTCGAGCAGGCCGCTCCCGGCGACGACGTGATCGAGGAGATCGCCGGCCGGATGCCGACCGACGCCGAGCTCACCGCCTGA
PROTEIN sequence
Length: 752
MPKNGKPKGGRPSRNFEPRYAKKTAFHDRHAGGRPGRDERADAGERRSYSSDARSSDRRPGSISPKHRGYRPAEAGSAPKRRWTESERAGRDEARSIRGRAESGRREAPHRSDDHGFDGRRRFEERGERRFGDDHRGGRGFDRAGNGPRDSRFGREDRQRGERFGRDERGGRGFERRDERPRFDRDDRGARGFERRDDRSGRSHERRDDRPRFDRDDRGARGGVDRSDRGSRGYERRDDRFSRGDRPHFERRDDRRGGVDGSRDRFARSDRPAFDRSHGHRDDRSQNRFSREDRPGFESRDDRRDRPRREDRPSRSDWNRTATVKAHEEHVDVVHERLEAQAVQATEVADVTFSDLGLGSNIVEVLRNMGAETPFPIQAATIPSILEGRDVLGRGRTGSGKTIAFGAPLVESILLSQKGKRREIGRKPRALILAPTRELALQIDRTVQPIARSVGLFTTQIYGGVPQARQVGALKKGVDIVIGTPGRIEDLIEQHKLDLSEVRIAVLDEADHMAELGFAEPVQRILRKTGTDLHDGETSQKLLFSATLDREVAAIVDEFLVDPAVYEVAGEDQDHSSIEHRVLVIEHRDKAEVLNLLVDREGQTLVFARTRAYAEMLAEQFEDAGIPAVSLHGDLNQAKRTRNLQKLTSGKVQVLVATDVAARGIHVDDVGLVVQADAPDEYKTYLHRSGRTGRAGHSGRVVTLITRQRRRRMEELLSRAEIHAPFEQAAPGDDVIEEIAGRMPTDAELTA*