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scnpilot_solids1_trim150_scaffold_51_37

Organism: SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 40512..41141

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E4B776 similarity UNIREF
DB: UNIREF100
  • Identity: 77.2
  • Coverage: 206.0
  • Bit_score: 304
  • Evalue 1.10e-79
  • rbh
PadR family transcriptional regulator {ECO:0000313|EMBL:KDA04657.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 207.0
  • Bit_score: 310
  • Evalue 1.70e-81
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 204.0
  • Bit_score: 253
  • Evalue 4.20e-65

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Taxonomy

Microbacterium sp. CH12i → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGAGTCCCGCCGTCTTCTCGCACGGCGACCTGCGGCTGTACCTGCTGTCGCTGCTGAACGAGGCGCCGCAGCACGGCTACGGCATCATCCAGGCACTCACCGATCGCACCGGCGGCACGTACACGCCCAGTGCCGGCACCATCTATCCGCGCCTGGCGAAGCTGGAGGAGGAGGGCCTGGTCACCAAGACCGTCGAGGGACGCACCACCATCTACGCCATCACGGATGCCGGTCGCGCCGAGCTCGACGCCAGGACGGAAGACCTGGAGGGCATCGAGCAGGGACTGTCCGACTCGGTGCGGCTGATCGCCAGCGAGGTGCGGCACAGCGTGCAGGAGGCCATGCGCAGCCTGCGCGCCGACCTCGCCACGGCCGCGCAGGAGGAGCGTCGCGCCGCCAAGACGCGGCTGCGCTCGGACGGGATGAGCGATGAGCGCGTCACCAGCCGTGAGAACCTGCAGCGGGCGGATGCCGCGATCAACGCGTTCCGCGCCCAGGTGCGCACCGACCTGCGCACGCACGTCGCCCGCGGCTCCGTGCTGCCGGCCGCAGTGGTGACGGACCTCGAGCGGGCGCTCGACGACGCCGCCCACGCCGTGACCCGCGCGCTGTCGGCCCTGCGCGGCTGA
PROTEIN sequence
Length: 210
MSPAVFSHGDLRLYLLSLLNEAPQHGYGIIQALTDRTGGTYTPSAGTIYPRLAKLEEEGLVTKTVEGRTTIYAITDAGRAELDARTEDLEGIEQGLSDSVRLIASEVRHSVQEAMRSLRADLATAAQEERRAAKTRLRSDGMSDERVTSRENLQRADAAINAFRAQVRTDLRTHVARGSVLPAAVVTDLERALDDAAHAVTRALSALRG*