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scnpilot_solids1_trim150_scaffold_11_234

Organism: SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(244627..245292)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoE n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003487A57 similarity UNIREF
DB: UNIREF100
  • Identity: 90.3
  • Coverage: 207.0
  • Bit_score: 375
  • Evalue 4.20e-101
  • rbh
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:EYT59656.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.3
  • Coverage: 207.0
  • Bit_score: 375
  • Evalue 5.90e-101
sigH; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 81.6
  • Coverage: 201.0
  • Bit_score: 334
  • Evalue 2.00e-89

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Taxonomy

Microbacterium sp. UCD-TDU → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 666
ATGTCAACGATGCTGCTCGACGCCGTCGAACCCCTCTCTGAGGACGCGCTCGCCCGCCTAGACTGGCCGGTGATGGATGAGACGACAACCGCGGACCCTCGACGGGATTTCGAGGAGCAGGCGATCCCCTTCATGGATCAGCTCTATGCGGCGGCGATGCGCATGACGCGCAATCCCGCCGATGCGGCTGACCTCGTGCAGGAGACGTTCGTGAAGGCGTATGCCGCGTGGGCCTCGTTCTCGCAGGGCACGAACCTGAAGGCGTGGCTGTACCGCATCCTCACCAACACGTACATCAACATCTACCGCAAGCGTCAGCGCGAGCCGTATCAGGGCACGATCGACGACCTCGAGGACTGGCAGCTCGGCGGCGCCGAGTCGACCACGGCGTCTCACAGCCGGTCGGCCGAGGCTGAGGCAATCGACCGGATGCCGGCATCCGCCGTCAAGGACGCGCTGCAGCAGGTTCCCGAGGACTTCCGCCTGGCGGTGTACCTCGCCGACGTCGAGGGATTCTCCTATCAGGAGATCGCCGACATCATGAAGAGCCCCATCGGCACCGTGATGAGCCGCCTGCACCGAGGCAGGCGCATGCTGCGGGAGCTGCTGGCAGACTATGCCGCCGAGCGAGGGGTCGCCGCGGCTGAACCGAGGAGCACCACATGA
PROTEIN sequence
Length: 222
MSTMLLDAVEPLSEDALARLDWPVMDETTTADPRRDFEEQAIPFMDQLYAAAMRMTRNPADAADLVQETFVKAYAAWASFSQGTNLKAWLYRILTNTYINIYRKRQREPYQGTIDDLEDWQLGGAESTTASHSRSAEAEAIDRMPASAVKDALQQVPEDFRLAVYLADVEGFSYQEIADIMKSPIGTVMSRLHRGRRMLRELLADYAAERGVAAAEPRSTT*