ggKbase home page

scnpilot_solids1_trim150_scaffold_11_239

Organism: SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 248843..249091

Top 3 Functional Annotations

Value Algorithm Source
transcription factor WhiB n=1 Tax=Microbacterium yannicii RepID=UPI0002DC4CB7 similarity UNIREF
DB: UNIREF100
  • Identity: 96.3
  • Coverage: 82.0
  • Bit_score: 166
  • Evalue 1.40e-38
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 82.0
  • Bit_score: 167
  • Evalue 9.10e-39
regulatory protein similarity KEGG
DB: KEGG
  • Identity: 95.1
  • Coverage: 82.0
  • Bit_score: 165
  • Evalue 6.00e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium sp. C448 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 249
ATGGACTGGCGCGACAAAGCGGCCTGCCTTACCGTCGACCCCGAGCTGTTCTTCCCGGTGGGGAACACCGGACCGGCCGTCGACCAGATCGAGAAGGCGAAGGCCGTCTGCGCCACCTGCACCGTCACCGAGATCTGCCTGCAGTACGCTCTGGAGTCCGGTCAGGACTCCGGCGTGTGGGGCGGACTCTCCGAGGACGAGCGCCGTGCGCTGAAGCGCCGCGCCGCCCGCGCCCGCCGCGCCGGCTGA
PROTEIN sequence
Length: 83
MDWRDKAACLTVDPELFFPVGNTGPAVDQIEKAKAVCATCTVTEICLQYALESGQDSGVWGGLSEDERRALKRRAARARRAG*