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scnpilot_solids1_trim150_scaffold_11_253

Organism: SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(261974..262621)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Nocardiopsis alba RepID=UPI00034BE7B1 similarity UNIREF
DB: UNIREF100
  • Identity: 53.5
  • Coverage: 213.0
  • Bit_score: 210
  • Evalue 1.30e-51
HTH-type transcriptional regulator LutR {ECO:0000313|EMBL:KJL27248.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.3
  • Coverage: 218.0
  • Bit_score: 260
  • Evalue 2.10e-66
bacterial regulatory s, gntR family protein similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 213.0
  • Bit_score: 209
  • Evalue 1.20e-51

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Taxonomy

Microbacterium azadirachtae → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 648
GTGAACAGGGCACAGGAGCGTGAGCTCGAATCGACGAGAGTCGCGTCGTGGCTGCGTGATGCGATCGTCAGGGGAGCACGGGGCCCGGGAAGCCGGCTGATCGAGCGGGATCTTGCTGCGGAGTACGGCGTCAGCCGCGTGCCCGTGCGGAGCGCTCTGAGGGCCCTGGAGATCGAGGGGCTCGTCGAGCTGCGTCCGCGTACCTGGGCCATCGTGCGGGAGTTCACCCAGGAGGACCTCGCCGACCTCGACGAGGTGCGGCAGGTGCTCGAGCCGATGGCTGCGCGCCTCGCCGCGGAGCGGCGCAGCGAGGCAGGCGCCGAACGACTGCGCAGGGCGATCTCGGCCGCGCCCTCGACCATCGGCGCGGCGGCCGAATTCCATGAGATCGTCGTGGAACTGGCGGGCAATCGGCTGCTCGCCGACCTGATGGGCAGCATCCGCAGCCGACTGCGCTGGGAACTGGCGCAGCACGACGACCTGAGCCGCATCGCCGACGAGCACGTGGCACTCTATGAGGCGATCCGCGACGGGGACGGCGACAGGGCCGCTCAGCTGGCGAACGAGCACGTGCAGAGCATCCGTGGCGACAGACTGGCACGCGCCGAGGCGCTGCTCACCGGGTCGATCCCCGTCGTCGCGGACTGA
PROTEIN sequence
Length: 216
VNRAQERELESTRVASWLRDAIVRGARGPGSRLIERDLAAEYGVSRVPVRSALRALEIEGLVELRPRTWAIVREFTQEDLADLDEVRQVLEPMAARLAAERRSEAGAERLRRAISAAPSTIGAAAEFHEIVVELAGNRLLADLMGSIRSRLRWELAQHDDLSRIADEHVALYEAIRDGDGDRAAQLANEHVQSIRGDRLARAEALLTGSIPVVAD*