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scnpilot_solids1_trim150_scaffold_11_263

Organism: SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(276289..276969)

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000346EB44 similarity UNIREF
DB: UNIREF100
  • Identity: 93.4
  • Coverage: 226.0
  • Bit_score: 422
  • Evalue 2.30e-115
  • rbh
XRE family transcriptional regulator {ECO:0000313|EMBL:EQM77012.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 226.0
  • Bit_score: 422
  • Evalue 3.30e-115
mtrA; response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; K07670 two-component system, OmpR family, response regulator MtrA similarity KEGG
DB: KEGG
  • Identity: 83.6
  • Coverage: 226.0
  • Bit_score: 386
  • Evalue 7.70e-105
  • rbh

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Taxonomy

Microbacterium maritypicum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 681
ATGACCTCACGGATCCTCGTGGTCGACGACGACACGGCACTGGCCGAGATGATCGGCATCGTGCTGCGCACGGAGGGTTTCGACGTGCTGTTCTGCGCCGATGGTGCACTGGCCGTGGAGGAGTGGCGCTCCTCCCGTCCTGATCTCGTGCTGCTCGATCTCATGCTCCCCGGCATGGACGGCATCGAGATCTGCACCCGCATCCGCGCGGAGTCCGGCGTGCCGGTGATCATGCTCACCGCCCGCAGCGACACGGCCGACGTCGTCCGCGGTCTCGAGGTCGGCGCCGACGACTACATGGTCAAGCCCTTCAACCCGAAGGAGCTCGTCGCCCGCATCCGCACCCGCCTGCGGCCGGCGCCGCAGGCGACCGCCGAGGTGCTGCGCGTCGGGGACCTCACCATCGACGTCGATGCGCACGAGGTGCGTCGCGGCACGGCTCCCATCGCCCTCACCCCGCTGGAGTTCCAGCTGCTGGTCGCGCTTGCCTCCAAGCCGCAGCAGGTGTTCTCCCGCGAGATGCTGCTCGAGCAGGTGTGGGGCTATCACTACAAGGCCGACACGCGGCTGGTCAACGTGCACGTGCAGCGGCTGCGCGCCAAGGTCGAGCTCGATCCGGACAACCCCCGCATCGTGATGACCGTGCGCGGCGTCGGCTACCGCGCCGGGAGCATCAGCTAG
PROTEIN sequence
Length: 227
MTSRILVVDDDTALAEMIGIVLRTEGFDVLFCADGALAVEEWRSSRPDLVLLDLMLPGMDGIEICTRIRAESGVPVIMLTARSDTADVVRGLEVGADDYMVKPFNPKELVARIRTRLRPAPQATAEVLRVGDLTIDVDAHEVRRGTAPIALTPLEFQLLVALASKPQQVFSREMLLEQVWGYHYKADTRLVNVHVQRLRAKVELDPDNPRIVMTVRGVGYRAGSIS*