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scnpilot_solids1_trim150_scaffold_100_19

Organism: SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(15330..16394)

Top 3 Functional Annotations

Value Algorithm Source
putative geranylgeranyl pyrophosphate synthase n=1 Tax=Brevibacterium linens RepID=UPI00005100E9 similarity UNIREF
DB: UNIREF100
  • Identity: 63.2
  • Coverage: 340.0
  • Bit_score: 425
  • Evalue 5.70e-116
  • rbh
Geranylgeranyl pyrophosphate synthase {ECO:0000313|EMBL:KDA05618.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.6
  • Coverage: 340.0
  • Bit_score: 450
  • Evalue 3.00e-123
geranylgeranyl pyrophosphate synthase similarity KEGG
DB: KEGG
  • Identity: 43.8
  • Coverage: 352.0
  • Bit_score: 270
  • Evalue 5.60e-70

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Taxonomy

Microbacterium sp. CH12i → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1065
ATGCGTGAGCAGGCCGTCGGCGTCCGCCCGGCGACTGACGTCTTCGAGATGAGGTTCAGTGAGATCGTCCGGCGCGGGTCTGAGCGTTCTCGGGGCTTCTCTGCCCAGTACACGCAGCTCTGGGAGTCGCTGGAGAGGATCGCGGCTGGCGGCAAGCGGATCCGCCCTCGCACCCTTTTGGGCGCCTATGCCGCCCTGGGCGGCACTGACCAGTCCACGGCCGTGGACGCGGCGTGCGCGATCGAGCTCCTGCATCTCGCGCTGGTGATCCACGACGATGTGATCGATCGCGACCTCGTCCGGCGCGGGGAGATGAACATCACCGGGCGCTTCGCGGCGGATGCCGTGGTGCGCGGCGCGTCTCCGGAAGCCGCGCGGGCATGGGGCGAGGCGTCGTCACTGTTGGCCGGGGACCTCATGCTCACGGCTGCTCATTCGCTTCTCGCACGCCTCGATGTGTCTCGTGAGCGTCGAGAGGCCATCCTCGACGTGTTCGATGACGCGGTTTTCGAGAGTGCGGCGGGAGAGCACGACGACGTCTGGCTGAGTCTGCACCTGGAGGGGTATTCGTCGCAGCAGGTGCTGGAGATGGTCGATCGCAAGACCGCGTCGTACTCCTTCGCCGCACCGCTGCTGATCGCCGGCATCCTCGCCGGCGCGCCGACAGACCTCATCGCCGAGCTGAGCGACATCGCCCGGCGCATAGGGGTCGTCTACCAGCTGCGCGACGACGTTCTCGGTCTCTTCGGCGACGAGCGGCAGACGGGAAAGTCGGCGCTGAGCGATCTGCGCGCCGGGAAGGAGACGCTGCTGATCGCCTGCGCCCGGTCGGATCCGGCCTGGAACGTGGTCAGCGCGCTCTTCGGTGATGCGGACCTCGGCGCAGCCGACGCTCAACTGCTGCGGAGCGTGATCGAGGAATCGGGCGCGGTCGTCTTCGTCGAGTCGGTGATCGCCGAGCGCTGCGACGAGGTGAACCGGCTGGTCGCAGCATCCGCCCTGCCGGAGGCCCTGCGCGAGCAGCTGCTCTCGCTGACCCGCGCCTGCGCCTCGAGGGCCTCATGA
PROTEIN sequence
Length: 355
MREQAVGVRPATDVFEMRFSEIVRRGSERSRGFSAQYTQLWESLERIAAGGKRIRPRTLLGAYAALGGTDQSTAVDAACAIELLHLALVIHDDVIDRDLVRRGEMNITGRFAADAVVRGASPEAARAWGEASSLLAGDLMLTAAHSLLARLDVSRERREAILDVFDDAVFESAAGEHDDVWLSLHLEGYSSQQVLEMVDRKTASYSFAAPLLIAGILAGAPTDLIAELSDIARRIGVVYQLRDDVLGLFGDERQTGKSALSDLRAGKETLLIACARSDPAWNVVSALFGDADLGAADAQLLRSVIEESGAVVFVESVIAERCDEVNRLVAASALPEALREQLLSLTRACASRAS*