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scnpilot_solids1_trim150_scaffold_100_126

Organism: SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 124858..125112

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S18 n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K1N9_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 97.6
  • Coverage: 84.0
  • Bit_score: 161
  • Evalue 2.80e-37
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 84.0
  • Bit_score: 161
  • Evalue 3.90e-37
rpsR; ribosomal protein S18; K02963 small subunit ribosomal protein S18 similarity KEGG
DB: KEGG
  • Identity: 91.7
  • Coverage: 84.0
  • Bit_score: 152
  • Evalue 7.00e-35

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Taxonomy

Microbacterium sp. UCD-TDU → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 255
ATGGCTGGAAAGTCGAGCGGCGACCGCCGCAAGCCGCGGAAGGGTGGCAAGCCCACCGCTCCCGCGAAGTCGATCCGCGTGGGCGTCATTGACTACAAGGACGTCGCAACGCTTCGCAAGTTCATCTCCGAGCGCGGGAAGATCCGCGCCCGCCGTATCACCGGTGTCTCGGTCCAGGAGCAGCGTCTGATCGCCAAGGCGATCAAGAACGCTCGCGAGATGGCCCTGCTGCCCTACGCCGGCGCCGGCCGTTAA
PROTEIN sequence
Length: 85
MAGKSSGDRRKPRKGGKPTAPAKSIRVGVIDYKDVATLRKFISERGKIRARRITGVSVQEQRLIAKAIKNAREMALLPYAGAGR*