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scnpilot_solids1_trim150_scaffold_1558

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1558_trna_3
unknown

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comp(446..519)
DNA (74bp)
transferRNA Arg
scnpilot_solids1_trim150_scaffold_1558_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(569..1372)
DNA (804bp) protein (268aa)
ABC transporter; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
ABC transporter related protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F019_CONWI
ABC transporter related protein {ECO:0000313|EMBL:ADB49995.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_1558_2
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1390..1851)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI0003716C84
Uncharacterized protein {ECO:0000313|EMBL:CDO61039.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1558_3
Nocardia cyriacigeorgica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1869..2660)
DNA (792bp) protein (264aa)
Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Nocardia cyriacigeorgica (strain GUH-2) RepID=H6RCP4_NOCCG rbh
echA; Enoyl-CoA hydratase/isomerase family protein rbh
Enoyl-CoA hydratase/isomerase family protein {ECO:0000313|EMBL:CCF65187.1}; TaxID=1127134 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia cyriacigeorgica (strain GUH-2).;"
scnpilot_solids1_trim150_scaffold_1558_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(2779..4230)
DNA (1452bp) protein (484aa)
pyruvate kinase (EC:2.7.1.40); K00873 pyruvate kinase [EC:2.7.1.40] rbh
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Pyruvate kinase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCL3_CONWI rbh
scnpilot_solids1_trim150_scaffold_1558_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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4399..5868
DNA (1470bp) protein (490aa)
Cytochrome P450 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1K6_CONWI rbh
cytochrome P450 rbh
Cytochrome P450 {ECO:0000313|EMBL:ADB52169.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_1558_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(6342..6677)
DNA (336bp) protein (112aa)
HEPN domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3L3_CONWI
HEPN domain-containing protein
HEPN domain protein {ECO:0000313|EMBL:ADB52378.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_1558_7
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6730..7047)
DNA (318bp) protein (106aa)
DNA polymerase beta domain protein region n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3L4_CONWI
DNA polymerase beta domain-containing protein region
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
scnpilot_solids1_trim150_scaffold_1558_trna_2
unknown

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comp(8090..8178)
DNA (89bp)
transferRNA Ser
scnpilot_solids1_trim150_scaffold_1558_8
Mycobacterium kansasii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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8261..9472
DNA (1212bp) protein (404aa)
Conserved protein n=2 Tax=Mycobacterium marinum RepID=B2HSR8_MYCMM rbh
Alanine racemase, N-terminal domain protein {ECO:0000313|EMBL:EUA09959.1}; TaxID=1299327 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium kansasii 732.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_1558_9
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(9554..10906)
DNA (1353bp) protein (451aa)
FAD-linked oxidoreductase; K00103 L-gulonolactone oxidase [EC:1.1.3.8] rbh
FAD-linked oxidoreductase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FA21_CONWI rbh
FAD-linked oxidoreductase {ECO:0000313|EMBL:ADB53116.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_1558_10
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(10925..12076)
DNA (1152bp) protein (384aa)
LacY proton/sugar symporter n=1 Tax=Streptococcus sp. oral taxon 056 str. F0418 RepID=F9HG34_9STRE
Arabinose efflux permease {ECO:0000313|EMBL:AHY47172.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
major facilitator superfamily protein
scnpilot_solids1_trim150_scaffold_1558_trna_1
unknown

Not on your lists

12098..12186
DNA (89bp)
transferRNA Ser
Displaying 13 items

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