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scnpilot_solids1_trim150_scaffold_2173_10

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: 7598..8593

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Nocardiopsis halophila RepID=UPI000348798D similarity UNIREF
DB: UNIREF100
  • Identity: 56.8
  • Coverage: 322.0
  • Bit_score: 349
  • Evalue 3.70e-93
  • rbh
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 321.0
  • Bit_score: 344
  • Evalue 4.90e-92
  • rbh
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EFC81606.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 323.0
  • Bit_score: 344
  • Evalue 1.70e-91

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Taxonomy

Frankia sp. EUN1f → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 996
ATGGAGCGACTGCGCCCGAGCCTCACGGGCTACTGCTATCGCATGCTCGGCAGCGGCTTCGAGGCCGAGGACGCGACCCAGGAGACGCTGCTGCGCGCCTGGCGCCGCTCCGACACGCTCGCCGAGCCGGCGGCGCTGAAGTCCTGGCTCTTCACCATCGCCACCAACGTCTGCCTCGACCAGATCGACGCGCGCAAGCGCCGCGCCCGCCCGGTCGACCTCGCCGACGCCGGCACCGCCGAGACCCCCGTCGGCGCCCCCCTGCCGGAGGCCGACTGGGTCCTCCCGATCGCGGGCGGCCAGGTCGCCGACCCCGGCGCCGACCCCGAGGCCCAGGCCGCCGAGCGCGAGACCCTCCGCCTCGCCTTCGTCGCCGCCCTCCAGCACCTGCCCGCCCGCCAGCGCGTCGTCCTCGTCCTGCGCGAGGTGCTCCGCTGGAGCGCCAAGGAGGTGGCCGACGTCCTCGACACCTCGGTCGCCTCGGTCAACTCCGCCCTCCAGCGCGCCCGCGCCACCCTCGACGAGCTCGACCTCGAGGACTCCGACGCCCCCGCCCGCCCCGCGACCGAGGACGAGCAGCGGCTCCTCGACCAGTACCTCGAGGCCTTCGCCGAGTACGACATCGACCGCATCGTCGCCCTCCTCCGCTATGACGTCGTCTTCGACATGCCCCCGCTGCCCCTCTGGGTCCGGGGTCCCGAGGAAGTCGGCACCTTCATGCTCGGCCAGGGCGCCGCCTGCCGCGGCTCGAAGCTGATCGCCACCACCGCCAACGGCCTCCCCGCCTACGCCGCCTACAAACCGGACCCCGAGTCCGGCGCCTGGCTCCCCTGGTCCCTGACGCTGCTGGAAGCCGAGGCGGGCGACGGCGCCGCGGTCCCGACCATCACCGCCATCCACAACTTCCTCGCCCCCTTCCTGCCGAACCTCTTCGGCTCCTTCGGCCTGCCGGAGCGGCTGGAGGAGGCGGACCCGGTGATCAGCGCCGCTCGGTAG
PROTEIN sequence
Length: 332
MERLRPSLTGYCYRMLGSGFEAEDATQETLLRAWRRSDTLAEPAALKSWLFTIATNVCLDQIDARKRRARPVDLADAGTAETPVGAPLPEADWVLPIAGGQVADPGADPEAQAAERETLRLAFVAALQHLPARQRVVLVLREVLRWSAKEVADVLDTSVASVNSALQRARATLDELDLEDSDAPARPATEDEQRLLDQYLEAFAEYDIDRIVALLRYDVVFDMPPLPLWVRGPEEVGTFMLGQGAACRGSKLIATTANGLPAYAAYKPDPESGAWLPWSLTLLEAEAGDGAAVPTITAIHNFLAPFLPNLFGSFGLPERLEEADPVISAAR*