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scnpilot_solids1_trim150_scaffold_2767_5

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: 4288..5565

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Streptomyces sp. 351MFTsu5.1 RepID=UPI00036ED898 similarity UNIREF
DB: UNIREF100
  • Identity: 60.6
  • Coverage: 406.0
  • Bit_score: 446
  • Evalue 3.70e-122
  • rbh
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:ETK35375.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 414.0
  • Bit_score: 519
  • Evalue 6.30e-144
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 56.4
  • Coverage: 424.0
  • Bit_score: 433
  • Evalue 7.90e-119
  • rbh

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Taxonomy

Microbispora sp. ATCC PTA-5024 → Microbispora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1278
GTGAACCGGTCCGCCGCGGGCGCGACGGGCGGTGGCGCGGATCCCGACGCCGCCGTCGGCGCCGCCTTCCGCGAGGAGCGCGGCGCCGTCCTCGCGGCGCTGATCCGCCAGGTCGGCGACTTCACGCTGGCCGAAGACGCGCTGCAGGACGCCTTCGAGGCGGCGCTGGCGGCCTGGCGGCGCGACGGCGTCCCGGCCCGTCCCGGCGCCTGGCTGACGACGGCGGCGCGGCGCAAGGCGATCGACCGCCTGCGCCGCGCCGCCGCCACCGCGGGCCGGGCCGAGCGCCTCGCCGAGCTGCTGCGCCTCGATGCCGCCGCGGAGGAACCCGAGATGGACGAACCGACCGCGATCGACGATGACCGCCTGCGCCTGATCTTCACCTGCTGCCACCCGGCGCTCGGCCTCGAGGCGCGCGAGGCGCTCACCCTGCGCGCGCTCGGCGGCCTCACCACGGCGGAGATCGCCCGCGCCTTCCTCGTCGCCGAGCCGACCATGGCCAAGCGGCTGGTCCGCGCCAAGGCGAAGATCGCCGACGCCGCGATCCCCTACCGCGTGCCGCCCGACGAGGAGCTGCCCGAGCGCCTGCGCGGCGTGCTGCGCGTCCTCTACCTGATCTTCAACGAGGGCTACGTGCGGACCGGCGGCGAGGACCTGCTCCGTCCCGACCTCTGCGCCGAGGCGATCCGCCTGGCGACGCTGCTCGCCGAGCTGATGCCCGACGAGGCGGAGGCCTGGGGCCTCCTGGCGCTGATGCTGCTGCACGACGCGCGCGGCGCGGCGCGGACCGACGCGGCGGGGCGCTTCGTCGCGCTCGGCGAGCAGGACCGCTCGCGCTGGGACGAGGCGGAGCTCGCCCGCGGCCACGCGGCGCTCGCCCGCGCGATCCGCCTCGGCCCGCCCGGCCCCTACGCACTGCAGGCGGCGATCACCGCGCTCCACGTCGACGCGCCGGATCCCGCGGACACCGACTGGGCCCAGGTCGCGGCGCTCTACGCGCGCCTGGCGGAGCTCGACCCGTCCCCGGTCGTCGCCGTCAACCGCGCCGCCGCGGTCGGCTTCGCCGAGGGACCGGAGCGGGGACTGTCCCTGCTCGAACCGCTGCTCGCCGACCCCAAGCTGGAGCGCTACGCGCCCCTCCACGCCACCCACGCCGACCTCCTGCGCCGCCAAGGCGACACGCGAGGCGCCGCGGTCGCCTACGAGCGCGCCGCCGCCGCCAGCGCCAACGCGGTCGAGCGCACCGAGCTCCGCCGCCGCCGCTCCACCCTTCCGTGA
PROTEIN sequence
Length: 426
VNRSAAGATGGGADPDAAVGAAFREERGAVLAALIRQVGDFTLAEDALQDAFEAALAAWRRDGVPARPGAWLTTAARRKAIDRLRRAAATAGRAERLAELLRLDAAAEEPEMDEPTAIDDDRLRLIFTCCHPALGLEAREALTLRALGGLTTAEIARAFLVAEPTMAKRLVRAKAKIADAAIPYRVPPDEELPERLRGVLRVLYLIFNEGYVRTGGEDLLRPDLCAEAIRLATLLAELMPDEAEAWGLLALMLLHDARGAARTDAAGRFVALGEQDRSRWDEAELARGHAALARAIRLGPPGPYALQAAITALHVDAPDPADTDWAQVAALYARLAELDPSPVVAVNRAAAVGFAEGPERGLSLLEPLLADPKLERYAPLHATHADLLRRQGDTRGAAVAYERAAAASANAVERTELRRRRSTLP*