ggKbase home page

scnpilot_solids1_trim150_scaffold_1017_5

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(5133..6029)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00035C87E6 similarity UNIREF
DB: UNIREF100
  • Identity: 47.1
  • Coverage: 308.0
  • Bit_score: 255
  • Evalue 8.50e-65
Integrase family protein {ECO:0000313|EMBL:EED06447.1}; TaxID=543302 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidocaldarius LAA1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.7
  • Coverage: 307.0
  • Bit_score: 237
  • Evalue 2.60e-59
site-specific recombinase XerD similarity KEGG
DB: KEGG
  • Identity: 41.4
  • Coverage: 304.0
  • Bit_score: 219
  • Evalue 1.60e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Alicyclobacillus acidocaldarius → Alicyclobacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 897
ATGAGTGGCTACCGGCGATCAAAGCCGAGCCTGAGGGCTTCGACCTTCGACTCCTATCGGATGATCATCGAGACGCGGATCGTGCCGCATGTCGGTCAGCTCCCGGTGCAAAAGCTGACGGCCCCGAAACTGAACCAGCTGTACGGCAAGCTGCTCGAAGGCGACGACGATCGCAAGGCACTCTCGGCACGCCCCGTCCGCTACACGCATGCGGTCCTCCGACACGCGCTGCAAGACGCGATTCGGTGGAACCGGGTCAGCCGAAACGTCGCCGACTCTGCCGAGCCCCCTTCCGCGAAGGCCGCCAAGGCAAAGGTGTCGCCGACTTGGGACCGCCATCAGCTACGGCAATTCCTCGAGGCCGAGCACGTCCGCAAGCATCGGCTCTACGCACTGTGGAGGCTCGTAGCTACGACCGGGACGCGGCGCGGCGAAGCACTGGCGCTGACCTGGCCGGACCTCGACCTTGAAGCTGGTCGCGCGAGCGTGACCGACTCGAAGACCGAAAGCGGCCGGCGACTTGTGGCCCTGGACGAGGAGACGTCCGCCACCCTGCGCGCCCATCGGAAGGCGCAGGCGGCAGAGCGCCTTGCGATGGGCCCGGCGTACGAGGCCAACATGCTCGTGTTCTGCCGCGAGGATGGCGAGCCGCTTCTTGGCCAGTCCGTATCGCGGACTTTCGGCCGGCTCGCCAAGAAAGCAGGCCTGCCGCAGGTCCGATTCCATGACCTCCGCCACGGACACGCGACCTTGGCGCTACAGGCCGGGGTGAATCCCAAAGTCGTGCAGGAACGGCTCGGTCACTCGTCGGTCGCGTTCACGCTGGACCGCTACTCGCATGCGATCCCGGCGCTCCAAGAGGACGCGGCGGCGAAGGTCGCGGCGCTACTGGACTAG
PROTEIN sequence
Length: 299
MSGYRRSKPSLRASTFDSYRMIIETRIVPHVGQLPVQKLTAPKLNQLYGKLLEGDDDRKALSARPVRYTHAVLRHALQDAIRWNRVSRNVADSAEPPSAKAAKAKVSPTWDRHQLRQFLEAEHVRKHRLYALWRLVATTGTRRGEALALTWPDLDLEAGRASVTDSKTESGRRLVALDEETSATLRAHRKAQAAERLAMGPAYEANMLVFCREDGEPLLGQSVSRTFGRLAKKAGLPQVRFHDLRHGHATLALQAGVNPKVVQERLGHSSVAFTLDRYSHAIPALQEDAAAKVAALLD*