ggKbase home page

scnpilot_solids1_trim150_scaffold_1017_20

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(15882..16502)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00036D1E66 similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 208.0
  • Bit_score: 157
  • Evalue 1.70e-35
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CEL22994.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.5
  • Coverage: 202.0
  • Bit_score: 180
  • Evalue 3.40e-42
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 207.0
  • Bit_score: 141
  • Evalue 2.30e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Kibdelosporangium sp. MJ126-NF4 → Kibdelosporangium → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 621
ATGCCCGTAGCCGCGGGGGAAACGCTCGATCCGCGGCGGACCCGACGGCGGATCCTCGATGCCGCCGCGGAGCTCTTCTACGCACGCGGGGTGAACGCCGTCGGCGTCAACGAGATCGCCGCCGCGGCGGGAGCGTCGAAGGTCTCGCTCTACCGCAACTTCGAATCCAAGGACGACCTCGTCGCGGCCGTTGTCGCCGAGCGCTCGGATCGCGTTCACGGCTGGCTGCGGGCCGGCAGCGATGACGCGCCCGCCGGAACGGCGCGGATCCTGAAGCTCTTCGATCTCCTCGCCGAATGGTTCGCCGAGCCCGGCTTCCGCGGGTGCGCCGTCCTCAATACGGCGGTCGACACCCGCGCCGCGTCCCGCTCAGGCGAGCGGGACGCGGCGCGGGAGATCGCCACGACCGTGCACCGTCACCTCGAGCGCTATCTCGAGCTTTTGACCGAGCTGCTCGCCGAACTCGAGCCGCCCCCGACCGACGCCGACTTCCTCGCCCGCCAGTTGCTCGTCTTGATCGAGGGCGCCACCGCCGTGGCCGCCGCCCGGCCGGACGAGGCGACGCGCTCGCTGGCCGCCGCCCGGGCCGCCGCCGCGGCGCTCATCGCCGGCCGCTCCTGA
PROTEIN sequence
Length: 207
MPVAAGETLDPRRTRRRILDAAAELFYARGVNAVGVNEIAAAAGASKVSLYRNFESKDDLVAAVVAERSDRVHGWLRAGSDDAPAGTARILKLFDLLAEWFAEPGFRGCAVLNTAVDTRAASRSGERDAAREIATTVHRHLERYLELLTELLAELEPPPTDADFLARQLLVLIEGATAVAAARPDEATRSLAAARAAAAALIAGRS*