ggKbase home page

scnpilot_solids1_trim150_scaffold_1036_6

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: 5415..6497

Top 3 Functional Annotations

Value Algorithm Source
Histone deacetylase superfamily id=3858485 bin=GWC2_Chloroflexi_73_18 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 46.6
  • Coverage: 350.0
  • Bit_score: 280
  • Evalue 1.80e-72
histone deacetylase superfamily protein similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 349.0
  • Bit_score: 269
  • Evalue 1.70e-69
Tax=RBG_16_RIF_CHLX_72_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 45.1
  • Coverage: 359.0
  • Bit_score: 281
  • Evalue 1.40e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_CHLX_72_14_curated → RIF-CHLX → Bacteria

Sequences

DNA sequence
Length: 1083
GTGGACCAGATCCCGGTCATCAGCTCCCCGGCCCACGTGGGTCACGCCCCGGCGATGGAGATCATCGCCGGGGTGGCGATCCCCTCGATCGACATGGTCGAGCGCGTCGACGTGATCGAACGGGCGCTGGTCCGCGAGTCCGGCTATCGCTTCGAGCGGGGACGCGAACACGGCGAGGAGCCGATCCTCGCCGTGCACTCAGCGGCGATGGTCGAGTTCCTCCGCACCGCCTGGGAGCGCCACGGCCACCTCTGTCCCGAGGGCACCGACGCGATCGTGGCCGACACCTTCGTCCACGCGCGGCTGCGGGCCGGGCTCGAGCCGCTGGAGGATTGCCGGCAGGGCCCGCCGACGATCGGCGAGTTCACCTTCGACACGATCGCCGCGGTCGGCCCCGACACCTTCGCCGCCGCCCGCGCCGCCGTCGACGTCGCCCTCACCGGGGTCGACGAGGTGCTGGCCGGCGCGCCGCTGGCCCTCGCGCTCTGCCGCCCGCCGGGCCATCACGCCACCCGCGACCTCTTCGGCGGCGGCACCTACCTGAACAACGCCGCGATCGCCGCCGAAGCGCTCCGCCGCGCGGGCCTCGAGCGGGTCGCGATCCTCGACACCGACTACCACAGCGGCAACGGCACCCAGTCGATCTTCTACGATCGCGGCGACGTCCTCTTCGCCAGCATCCACGCCTCGCCGGCCCGGGCCTACCCCTTCCACGTCGGCTGGGAGGAGGAACGCGGGGTGGGCGAGGGGGCCGGCGCGACCCTCAACGTGCACCTGCCCCCGGACACCGGCGGCGCCGACTACCTCGGGCTGCTGGCGCCGGTGCTGGCGCGGATCGCCGACTTCGAGCCCCAGGTGCTGGTGGTCTCGCTCGGCTTCGACACCTACGTCGACGATCCCTTCGACGGCGGGCTGACGATCGGCGACTACGGCGAGATCGGCCGCGCGATCGGGGAGCTGCGGCTCCCGACCCTGGCGGTGCTCGAGGGCGGCTACAACCTCGAAGGCCTCGGCGCCGGGCTTGCCGCCTGGATGGAAGGCGCCGGCTCGGCGCGGGCGACGCCGGTCGCGGAGTCCTCATGA
PROTEIN sequence
Length: 361
VDQIPVISSPAHVGHAPAMEIIAGVAIPSIDMVERVDVIERALVRESGYRFERGREHGEEPILAVHSAAMVEFLRTAWERHGHLCPEGTDAIVADTFVHARLRAGLEPLEDCRQGPPTIGEFTFDTIAAVGPDTFAAARAAVDVALTGVDEVLAGAPLALALCRPPGHHATRDLFGGGTYLNNAAIAAEALRRAGLERVAILDTDYHSGNGTQSIFYDRGDVLFASIHASPARAYPFHVGWEEERGVGEGAGATLNVHLPPDTGGADYLGLLAPVLARIADFEPQVLVVSLGFDTYVDDPFDGGLTIGDYGEIGRAIGELRLPTLAVLEGGYNLEGLGAGLAAWMEGAGSARATPVAESS*