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scnpilot_solids1_trim150_scaffold_969_11

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(7398..8180)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Frankia sp. QA3 RepID=I9A1V3_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 42.4
  • Coverage: 231.0
  • Bit_score: 165
  • Evalue 6.00e-38
Transcriptional regulator {ECO:0000313|EMBL:EIV93376.1}; Flags: Precursor;; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.4
  • Coverage: 231.0
  • Bit_score: 165
  • Evalue 8.40e-38
TetR family regulatory protein similarity KEGG
DB: KEGG
  • Identity: 41.0
  • Coverage: 229.0
  • Bit_score: 161
  • Evalue 4.60e-37

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Taxonomy

Frankia sp. QA3 → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 783
ATGGGTGACGAGCCGACCACCTGCCGCCGCGCCGAGATCGTCGCCGCCGCGGTGCGGATCGCCGACGCGGAGGGCGTCGACGCGGTCTCGATGCGCCGCCTCGCCGACGAGCTCGGCGTCGCGACGATGACCCCCTACACGCACGTCGAGTCCAAGGACGAGCTGATCGACCTGATGCGCGACGCGGTCGCCGCCGAGATGATCCTCCCCGAGCCGATCCCCGACGACTGGCGCGAGGCGCTCCGCGCGATCGCCCACAAGACCAAGGACGCCTTCGAAGCCCACCCCTGGAGCCTCGACATCACCTCCCGCCGGCCCCGTGCCCGGATCAACCGCCTCCGCCACGTCGAGCAGTCGGTGGCGATCATGGTCCGGCTCGAGGTCGCCCCGCAGACCGGCCGCGCGATCCTGATGTCGATCGACGACTACGTGATCGGCTACTGCGCGCGCAAGCGGATGCGCCAGCGCATGCTCGACTCGCTCGGCGCCGAGGACAAGGAGGCGCTCCACTCCTTCCGCGACCCCGACCCCGAGGTCGCCGCCGCGCTCGAGGCGGGCGAGCTGCCGCTGGTCAAGAAGATCACCGGCCACCGCCACCGCAAGCACCCCTTCGGCGTACCGCCAGACTCCGGCTTCGAGCCCGGCCTCGAGTGGCTGCTCGACGGCATCGAAAAGACGGTCGGCGCGCCGAGCGAGGGCATCGAGCCCGGCGAGCTGCTGACCGGCCATGACGAACTGGACCAACGCCTCACCCGCATCCGCGCCGAGGCGCGGTCGTCTTAA
PROTEIN sequence
Length: 261
MGDEPTTCRRAEIVAAAVRIADAEGVDAVSMRRLADELGVATMTPYTHVESKDELIDLMRDAVAAEMILPEPIPDDWREALRAIAHKTKDAFEAHPWSLDITSRRPRARINRLRHVEQSVAIMVRLEVAPQTGRAILMSIDDYVIGYCARKRMRQRMLDSLGAEDKEALHSFRDPDPEVAAALEAGELPLVKKITGHRHRKHPFGVPPDSGFEPGLEWLLDGIEKTVGAPSEGIEPGELLTGHDELDQRLTRIRAEARSS*