ggKbase home page

scnpilot_solids1_trim150_scaffold_789_13

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(8902..9372)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Nocardiopsis potens RepID=UPI000365C0FB similarity UNIREF
DB: UNIREF100
  • Identity: 44.9
  • Coverage: 127.0
  • Bit_score: 106
  • Evalue 3.40e-20
Uncharacterized protein {ECO:0000313|EMBL:KKK75878.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.4
  • Coverage: 143.0
  • Bit_score: 126
  • Evalue 3.40e-26
Integrase, catalytic region similarity KEGG
DB: KEGG
  • Identity: 47.8
  • Coverage: 115.0
  • Bit_score: 104
  • Evalue 4.00e-20

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 471
ATGGACACCAGGCGCTTCGCCCGCTTCACCAGGCCCGGCCACGCGGTCACGGGGGATCGTGCCACCACCGGTGCCCGGATGCGGGAGCGGGTCGGCCACGAGCTCACCCACTCGATGATCGACGACCACTCCCGCCTCGCCTACACCGAGCTGCACCGCGACGAGAGGGCCGCCACGGTGACCGGGTTCGTGGAACGGGCGATCGCCTTCTTCCGGGCCCACGGGGTCGAGCCGAGGAGGTTTCAGTCCGACAACGCCTGGACCTACGCGAGGAACCGCGACCTGGGCGCCCCGCTCGCCCGGGAGGGCATCGCCCACCGCACGATCCCGCCGCGCACCCCGAAGCGGAACGGCAAGGTCGAGCGCTACCAGCAGACGCTCAAGCCACTACAACCCCACCCGACGCCACAGCTCGACGGCAACAGGCCTCCGATCATCCGCGTTCGGGACGTCCTGAGGCCGGACAGCTGA
PROTEIN sequence
Length: 157
MDTRRFARFTRPGHAVTGDRATTGARMRERVGHELTHSMIDDHSRLAYTELHRDERAATVTGFVERAIAFFRAHGVEPRRFQSDNAWTYARNRDLGAPLAREGIAHRTIPPRTPKRNGKVERYQQTLKPLQPHPTPQLDGNRPPIIRVRDVLRPDS*