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scnpilot_solids1_trim150_scaffold_3190_4

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(2087..3211)

Top 3 Functional Annotations

Value Algorithm Source
Collagen triple helix repeat-containing protein n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F303_SPHCR similarity UNIREF
DB: UNIREF100
  • Identity: 27.2
  • Coverage: 353.0
  • Bit_score: 86
  • Evalue 5.00e-14
collagen triple helix repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 27.2
  • Coverage: 353.0
  • Bit_score: 86
  • Evalue 1.60e-14
Collagen triple helix repeat-containing protein {ECO:0000313|EMBL:AEG50815.1}; Flags: Precursor;; TaxID=690566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum L-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 27.2
  • Coverage: 353.0
  • Bit_score: 86
  • Evalue 7.10e-14

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Taxonomy

Sphingobium chlorophenolicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1125
ATGCGACTGAAATGGATCCTCACCTGCTCCACCGCCCTCCTCCTGCTCGGCCTCGTGATGGCGCCGCTCGCCACCGCCAAGGGCCTCAAGGTCAGGAACGGAGTCGTTCACGCCTGCCTGCAGACGAAGGGCAAGAAGTCGGAGCGGGGGACGATCCACGTGGTCAACTCGCCGAAGCAGTGCAAGAAGCGGAAGGGTGAACGGCCGCTGACCTGGGCTCTCGCGGGCTCGACGCCCACCTCCGCCGGCACCGGCAGCGAGGGCGCGACCGGGCCGCAGGGACCGGCGGGACCGCAAGGCGCCACCGGCGCGCCCGGCCCGGCGGGCGCCACCGGGGGGACCGGCGGTCAAGGCGAAAAAGGCTCGGCGGCGACGGTCGAAGACAAACTCAAAGAAACGATCGTCGACCAGAGCAAAGAAATTCAGCTGCTGCTCGGCAAAGTCGGCTCGCTGACGACCGAAGTCATCGACCTCGAAGAAGGCCTCGGCACGGTGAAATCCTCGGTGACCGACCTCGGCCAATCCGTCAACGAATCGTTGGGGAGCCTGAAGACCGAACTGAACGGCAACCTCGACACCGTCAAGACGGGCCTCGAAGGCACGATCGGCGGCGTCAAGACCAATCTCGAAGGCACGATCGAAGGAGCCCAGACGAACCTCACCGGCCTGGAAACCGACGTCGAAGGCCTGCTCTCGACGATGAACGTCCTGGAACCGCTCACCGGCAACGTCAAAGCCCTCGAAGAACTGCCGGCCACCGTCACGGCGCTGAACGGCACCGTCAGCGGTCTCACGACGACCGTCACGAAACTGCAACCGCTCACCGCGAACGTGGACGCGCTCAAAGACCTGCCCGAAACCGTCGACACGCTGTCAGGAAACCTCAGCACGCTGAACGGGACCGTCACCGAACTCAAACCGCTGACCGGGAGTGTCGAAGCCTTGAACAAACTCCCGACGGAAGTCACCAGCCTGGGCACCAAGGTCAACGGTCAGTGCACGAGCCTGAGCGAAGTCGTCACCCAGACGAACAGCCTGACCACCGTCGTCGGCGAACTGATCAACGCCGTCGGCAAACTGCTCGGTCTCGAAACGCCGACGAAGACGAAACCCGTGACCTGCTGA
PROTEIN sequence
Length: 375
MRLKWILTCSTALLLLGLVMAPLATAKGLKVRNGVVHACLQTKGKKSERGTIHVVNSPKQCKKRKGERPLTWALAGSTPTSAGTGSEGATGPQGPAGPQGATGAPGPAGATGGTGGQGEKGSAATVEDKLKETIVDQSKEIQLLLGKVGSLTTEVIDLEEGLGTVKSSVTDLGQSVNESLGSLKTELNGNLDTVKTGLEGTIGGVKTNLEGTIEGAQTNLTGLETDVEGLLSTMNVLEPLTGNVKALEELPATVTALNGTVSGLTTTVTKLQPLTANVDALKDLPETVDTLSGNLSTLNGTVTELKPLTGSVEALNKLPTEVTSLGTKVNGQCTSLSEVVTQTNSLTTVVGELINAVGKLLGLETPTKTKPVTC*