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scnpilot_solids1_trim150_scaffold_3190_7

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: 4584..5852

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 id=14631940 bin=bin9_gal15 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15 similarity UNIREF
DB: UNIREF100
  • Identity: 70.0
  • Coverage: 413.0
  • Bit_score: 561
  • Evalue 7.90e-157
ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 416.0
  • Bit_score: 554
  • Evalue 4.00e-155
Tax=CSP1_3_Armatimonadetes similarity UNIPROT
DB: UniProtKB
  • Identity: 70.0
  • Coverage: 413.0
  • Bit_score: 561
  • Evalue 1.10e-156

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Taxonomy

CSP1_3_Armatimonadetes → Armatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1269
ATGGCGGCGGCGCCGGCCGAGGCCAGGGCGGCGGTCGAGGCGGTCTGGCGGATCGAGTCCGCCCGCCTCGTCGCCGGCCTGGCGCGGCTGGTCCGGGACGTCGGGCTGGCCGAGGACCTGGCGCAGGACGCGCTGCTGGCGGCGCTCGAGCGCTGGCCGCGCGACGGCGTCCCCGACAACCCCGGCGCCTGGCTGATGGCGACGGCGAGGAACCGGGCGATCGACCTGGCGCGGCGGGCGTCGACCTACGAGCGCAAGCGCGAAGAGGTCGCGCACGAGCTGGTGGTGATGCTGGCGATGGACGCGGTCGACTTCGCGGCGCGGGCCGACGACGAGGTCGGCGACGAGCTGCTGGCGCTGATGTTCACCTGCTGCCATCCGGCGCTCCCGACCGAGGCGCGGGTGGCGCTGACGCTGCGCCTGCTCGGCGGGCTGACGACGGCGGAGATCGCCCGCGCCTTCCTGGTCGGCGAGCCGACCGTGGCGCAGCGGCTGACGCGGGCGAAGCGGACGCTGCGCGAGGTGCGGACGGACTTCGAGGTGCCGACGGGGAGCGCGCTGCGGGCGCGGCTGCCGGACGTGCTCGAGGTCGTCTACCTGATCTTCAACGAGGGCTACGCGGCGAGCTCCGGCGAGCGTTGGGTGCGGACGGAGCTGTGCGAGGAAGCGCTGCGCCTGGGGCGGATCCTCGCCGCGCTGGCGCCGGCGGAGCCGGAGGCGCACGGGCTGATCGCGCTGCTCGAGATCCAGGCCTCGCGGCTGGGCGCGCGGCTCGGGCCCGACGGCGAGCCGATCCTGCTGCTCGACCAGGACCGCTCGCGCTGGGACCCGCTGCTGATCGTCCGCGGTGTGGCGGCGCTGAAGCGGGCCGAAGAGCTGCCGGCGCCGCTCGGGCCGTACGGCCTGCAGGCGGCGATCGCGGCCTGCCACGGGCGGGCGCTGGAGGCCGAGGAAACCGACTGGGTGCGGATCGCGGCGCTGTATGAGGCGCTGGCGGCGATCGCCCCGAGCCCGATCGTCGAGCTGAACCGCGCCGTCGCGGTCGGCATGGCCTTCGGTCCCGAGGTCGGGCTCGCGCTGCTCGAACGCATCGCCGCCGACCCGGCCCTGCGCGACTACCACCTCCTCCCCAGCGTCCGGGGCGACCTGCTCGCCCGCCTCGGTCGCGACGCGGAGGCCGCCGCCGAGTTCCGCCGCGCCGCCGACCTGACCGCCAACGCCCCCGAGCGATCCCTCCTCCTCCGCCGCGCCGCAAACCCCGGCGGGTGA
PROTEIN sequence
Length: 423
MAAAPAEARAAVEAVWRIESARLVAGLARLVRDVGLAEDLAQDALLAALERWPRDGVPDNPGAWLMATARNRAIDLARRASTYERKREEVAHELVVMLAMDAVDFAARADDEVGDELLALMFTCCHPALPTEARVALTLRLLGGLTTAEIARAFLVGEPTVAQRLTRAKRTLREVRTDFEVPTGSALRARLPDVLEVVYLIFNEGYAASSGERWVRTELCEEALRLGRILAALAPAEPEAHGLIALLEIQASRLGARLGPDGEPILLLDQDRSRWDPLLIVRGVAALKRAEELPAPLGPYGLQAAIAACHGRALEAEETDWVRIAALYEALAAIAPSPIVELNRAVAVGMAFGPEVGLALLERIAADPALRDYHLLPSVRGDLLARLGRDAEAAAEFRRAADLTANAPERSLLLRRAANPGG*