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scnpilot_solids1_trim150_scaffold_1647_5

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(4392..5531)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Mycobacterium smegmatis JS623 RepID=L0IPH2_MYCSM similarity UNIREF
DB: UNIREF100
  • Identity: 59.0
  • Coverage: 363.0
  • Bit_score: 420
  • Evalue 2.00e-114
  • rbh
ABC-type dipeptide/oligopeptide/nickel transport system, permease component similarity KEGG
DB: KEGG
  • Identity: 59.0
  • Coverage: 363.0
  • Bit_score: 420
  • Evalue 6.10e-115
  • rbh
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:AGB20753.1}; TaxID=710686 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis JS623.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.0
  • Coverage: 363.0
  • Bit_score: 420
  • Evalue 2.70e-114

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Taxonomy

Mycobacterium smegmatis → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1140
GTGCCTCCCGAGTCTGAGAAACAAGGCACCGAGGCGCCGATCCCCACCGGGACCGGCGCCTTGGATGCCGGCTTGGGCATCGAATCCGACGGCGCCCGCGTAGTCGAGGCGGAGGCCGGCGACGGTCGCCAGGCCGGCGGCCCTTGGAGGATCGCCGGGCGGCGCCTGCGTCGCAACAAGGTGGCGCTGTTCTCGCTCGCGATCTTCTTCCTGATCGTCATCTGCTGCCTGCTCGCGCCGGTCTGGGCCAATCACGTCGCCGACACCGGTCCCAACACCACCCACACGCTGGAGAAACTCCACGTGAACGGGGAAGTGAGGGAAGTGGTCGAACCGAGCGGCAAGGCGATCGGCCCGCAGTGGTTCGAAGCCGGGGGCAAGTTCTTCCTCGGCGCCGACGGCCACCTCGGACGCGACGAGATGGTCCGCCTTCTCTACGGCGGCCGTTCCTCACTCTTCATCGGCATTGTCGCCGCGCTCATCACGACCCTGTTGGCGGTGACGCTCGGCCTGCTCTCCGGTTACTACGGCGGCCTCACCGACACCTTCATCTCGCGGATCATGGACGTCATCTGGTCCTTCCCGGTGGTGCTCTTGGGCATCGCCCTGGGTATCGCCTTGGCGGTGGGGGGCCTGAAGTTAGGTCCGATCCACCTCAAGTCGAGCTCCTTATGGATCCCGACCCTCATCATCGGCGTGGTCTACACGCCGTACATGGCGAGGCCGTTGCGCGGCGAAATCCTCGCCCTACGCGAGAAAGAGTTCATCGAGGCCGCGGTCGCCCAGGGCGCGAGCGACCGCCGGATCATGTTCATCGAGCTGCTGCCCAACCTGCTCTCGACGATCATCGTCTTCTTCACCCTCAACATCGCCAACAACATGTTGTTGGAGGCAACCCTTTCCTACCTCGGCGCCGGCGTTCAGCCGCCCTCTTCCTCCTGGGGAACGATGATCTCGGAAGGGTTCGACGCCCTCTACAGCCAGCCGATCCTGACCATCATCCCGGGCACCGCGATCCTCCTCACCGTACTGTCCGTGAACGTCTTCGGTGACGGCCTGCGCGATGCGCTCGACCCCAAGTCGAAGGTCCGCTTCGAGGCTCGCGCGGGCACCGCCGCCGAGATGGACAATCCGGTCTGA
PROTEIN sequence
Length: 380
VPPESEKQGTEAPIPTGTGALDAGLGIESDGARVVEAEAGDGRQAGGPWRIAGRRLRRNKVALFSLAIFFLIVICCLLAPVWANHVADTGPNTTHTLEKLHVNGEVREVVEPSGKAIGPQWFEAGGKFFLGADGHLGRDEMVRLLYGGRSSLFIGIVAALITTLLAVTLGLLSGYYGGLTDTFISRIMDVIWSFPVVLLGIALGIALAVGGLKLGPIHLKSSSLWIPTLIIGVVYTPYMARPLRGEILALREKEFIEAAVAQGASDRRIMFIELLPNLLSTIIVFFTLNIANNMLLEATLSYLGAGVQPPSSSWGTMISEGFDALYSQPILTIIPGTAILLTVLSVNVFGDGLRDALDPKSKVRFEARAGTAAEMDNPV*