ggKbase home page

scnpilot_solids1_trim150_scaffold_1658_2

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(1290..2318)

Top 3 Functional Annotations

Value Algorithm Source
LacI family transcriptional regulator n=1 Tax=Rhodococcus wratislaviensis IFP 2016 RepID=L2TWY1_9NOCA similarity UNIREF
DB: UNIREF100
  • Identity: 67.7
  • Coverage: 328.0
  • Bit_score: 449
  • Evalue 3.50e-123
  • rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:AII10593.1}; TaxID=37919 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.6
  • Coverage: 328.0
  • Bit_score: 457
  • Evalue 1.80e-125
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 337.0
  • Bit_score: 417
  • Evalue 3.60e-114
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodococcus opacus → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1029
ATGGCGAAGCAGCGCCGACCAACGATGAAAGACGTTGCCGCCCACGCGGGCGTGTCGCTGAGCACGGTCAGTTACGTCCTCAACGACTCCGGCCCGGTCGCCAGCGACCGGCGCGCCCGCGTGCTCGACGCGATCCGGATCCTCAACTACACCCCGAACGAGTCGGCGCGCAGCCTCAAGCGGCGCTCCGCCTCGACGATCGGCCTGATCGTCCCCGACCTCGCCAACCAGTACTTCGCGCTGGTCGCCGAGGGGGTCGAGCGGGAAGCGTCGGAGCGGGGCGTCTTGGTCGTCCTCTGCGTGCCCCAGGCGACCGGCAAAAGCGACGACTTCTACGCCCAGCTGCTGCGCAGCCAGCGCCTCGACGGCGTCGTCTACCTCTCCGCGACCGGCACGCTGCCGTCGCTGATCCTGGAGCTGACCCGCTCCGGGGCGGTGGTCCTGGTCGACGAGCAGATGCCCGGCTTCAAACTGCCCGCGGTGGTTGCCGACAACCGGCGCGGCGCGCGCGAGATCGCCCAGCACGTGATCGGCGCGGGGCACCAGCGGATCGCGCTGATCGGCGGCCCGGCGCCGCTCTGGAGCGCCGACCAGCGCCTGGCCGGGTACCGCGAGGCGCTTGCCGCGGCGGGCCACAACCCCGACGAGGTGCCGTTCTTCGGCGGCGACTATCGGCAGCGCTCCGGCTATGAGCTGGCGGCGAAGGCGCTTGACGTGGCGCCCGCCGAGCGTCCCACGGCGCTGATCTGCGCCAACGACCTGATGGCGTTCGGCGCACTGGAGTACTGCCGGGAGCAGGGGATCCAGGTGCCCGCGGACCTGACGATCGTCGGCTTCGACGACGTCCCGACGGCCTCGCTGGTGACGCCGCGGCTGACCACGATCCGGCAGCCGGCGACCGACCTCGGCGCCGCCGCTGCCCGCCTTCTCTTCGCTCTGATCGCCGACGAGGAGGAGGCGACTCCGCCGATGCCCTTCCCGACCACATTGATGGAACGGGAGTCGGTGGGGCCGCCGGCGCCGCGGTGA
PROTEIN sequence
Length: 343
MAKQRRPTMKDVAAHAGVSLSTVSYVLNDSGPVASDRRARVLDAIRILNYTPNESARSLKRRSASTIGLIVPDLANQYFALVAEGVEREASERGVLVVLCVPQATGKSDDFYAQLLRSQRLDGVVYLSATGTLPSLILELTRSGAVVLVDEQMPGFKLPAVVADNRRGAREIAQHVIGAGHQRIALIGGPAPLWSADQRLAGYREALAAAGHNPDEVPFFGGDYRQRSGYELAAKALDVAPAERPTALICANDLMAFGALEYCREQGIQVPADLTIVGFDDVPTASLVTPRLTTIRQPATDLGAAAARLLFALIADEEEATPPMPFPTTLMERESVGPPAPR*