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scnpilot_solids1_trim150_scaffold_1664_2

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: 1875..2618

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Frankia sp. QA3 RepID=I9A1V3_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 52.2
  • Coverage: 245.0
  • Bit_score: 218
  • Evalue 9.60e-54
Transcriptional regulator {ECO:0000313|EMBL:EIV93376.1}; Flags: Precursor;; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.2
  • Coverage: 245.0
  • Bit_score: 218
  • Evalue 1.30e-53
TetR family regulatory protein similarity KEGG
DB: KEGG
  • Identity: 52.7
  • Coverage: 239.0
  • Bit_score: 217
  • Evalue 5.20e-54

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Taxonomy

Frankia sp. QA3 → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 744
ATGGCAGCGGGACTAGACACCGTCTGGGCACGTGACGAGGAGCAGTCCTCGGGCCCCCAGCCCCTCTCGCGGGAGGCGATCGTGCTGGCCGCGATCGAGATCGCCGACGCCGATGGCCTGGAGGCCGTGTCCATCAGGAGACTTGCTACCAAGCTCGACGCCCGCCCGATGAGCCTTTACTCACACATCGACCGCAAGGGCGACCTGATCGATCTGATGGTCGACGAGGTGATGGCCGGCGCGATCATCCCCGGCGGCCCGCCGACCGACGACTGGCGCGAGGCCCTCCGCCAGATCGCCCAGCGCACCCGCGAGTCGACCCGCGCCCACCCCTGGATGATCGCCGCCGCCTTCCACCGCCCCTTCCTCGGCCCCAACGCCCTCCGCCACATCGACCAGTCCCTGGCCGCCGTCTCCGAGCTCCCCCTCTCCCCCGAGCGCAAGCGCGCCGTCCTCCTCGCCGTCGACACCTACACCCTCGGCTTCGTCCGCTGGGAGGTGATGTCGCCGAAGGCCAAGGGCGGCGCCCCCTGCGCCCGCCACCCCGAGGCAGGCCCGAGCGCCGCCGAGATCGACGCCTACATCGCCGCCCAGGCGGCGAGCGGCGACTACCCCCACCTGGCCAAGTTCGTCGGCAAGGACATGGGCCTCAGCGTCAAGGCCGAGCGCTTCGAGATCGGCCTCGAGTGGCTCCTGGCCGGCATCGAAGCCGAGGTCGGCGACGCTCGATCCGCCGCGGACTGA
PROTEIN sequence
Length: 248
MAAGLDTVWARDEEQSSGPQPLSREAIVLAAIEIADADGLEAVSIRRLATKLDARPMSLYSHIDRKGDLIDLMVDEVMAGAIIPGGPPTDDWREALRQIAQRTRESTRAHPWMIAAAFHRPFLGPNALRHIDQSLAAVSELPLSPERKRAVLLAVDTYTLGFVRWEVMSPKAKGGAPCARHPEAGPSAAEIDAYIAAQAASGDYPHLAKFVGKDMGLSVKAERFEIGLEWLLAGIEAEVGDARSAAD*