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scnpilot_solids1_trim150_scaffold_1416_1

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: 2..1600

Top 3 Functional Annotations

Value Algorithm Source
ribose import ATP-binding protein RbsA 1 (EC:3.6.3.17); K10441 ribose transport system ATP-binding protein [EC:3.6.3.17] similarity KEGG
DB: KEGG
  • Identity: 46.5
  • Coverage: 499.0
  • Bit_score: 404
  • Evalue 4.90e-110
lantibiotic ABC transporter permease n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B6A03F similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 495.0
  • Bit_score: 480
  • Evalue 2.90e-132
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:GAF47096.1}; TaxID=1219028 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis NBRC 100605.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.2
  • Coverage: 502.0
  • Bit_score: 498
  • Evalue 8.50e-138

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Taxonomy

Rhodococcus wratislaviensis → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1599
GTCGCTGGAACCGATCGGCTGATGACCGCCGTCCGTTCAGACGCGGCGGCCGGGGCTCACTCCTCCCCGGCCGCCGTGCCCGGCGGAGCGTCGGGCGTCCCCGTGCTCGAGGTGCGCGGGGTCCAGAAGCGCTACGGCGGCGTCCGCGCCTTGCGCGGCGCCGACCTGCGGCTCGCCCGCCCGGGTGCCGTCCACTGCCTGATCGGCGAGAACGGCTCCGGCAAGTCCACCCTGCTCGGGGTCCTCTCCGGGCAGGTCCAGCCCGACGCGGGCGAGGTCCGCCTCGACGGCGAGCCGGTCTCCTTCTCCAGCCCGCCCGCCGCGGTGCGGGCGGGGATCGCGATGGTCTCCCAGGAGACCGCGATCGCCCCTCACCTCTCGGTCGCCGAGAACGTCCTGCTCGGCGAGCGCCTGGTCCGGCGCCGCGGTCGCATCGACTGGCCCGCGACCCGCCGTCGCGCCCAGGAGGTCCTGGACCGCCTCCACCTCGACTACGACGTCGAGCTGCCGGTCGTCCGGCTGCGCCCCGACCAGCGGCAGATGGTCGAGATCGCCCGCGCCGTCTCGATCGACGCCCGCGTCCTGATCCTCGACGAGCCGACCAGCTTCCTCAGCCTCGACGAGGTCGACCGCCTGTTCGCCGCGGTCCGCGACCTCTCGGCCAACGGCGTCGCCACGATCTTCGTCTCCCACCGCCTGCCCGAGCTCTTCGCGATCGCCCACGAAGTGACGGTGCTGCGCGACGGCGCGACCGTCAGCTCCGGCCCGATCGCCGAGTACACGCCCGACCGGATCGTCCACGACATGGTCGGCGAGGCCCACGAGGCGCCCGCCGGGCGGACCGCGCGCGAACGGGTCGAGACCGCGGCGCCGCCCCGCCTCGAGGCGGTGGACGTCGCCGACGCCGTCGGCGTCCGGTCGGTGACGCTCGAGGTCGCCCCGGGGGAGATCGTCGGCATCGCCGGGCTTGCCGGCTCCGGTCGCAGCGAGCTGCTGGAGCTGATCTTCGGCGCCCGGGCGATGGCCGCGGGCACGGTCTCGGTCGACGGCAGGCCGGTCCGCCACCACGACCCGACCGCGGCGATCGCCGCCGGGATCGGCTTCGTGCCCGCCGAACGCAAGGTCGACGGCGTCGTCCTCACGATGAGCGTCTTCGACAACCTCGACATGGCGGCGGCGGGCTCGGCGGCCTGGTGGCGGCGCCCGCGCGGTCGCCGCGACGACGACGCCGCCGCCCGGGTGATCGCCGGCCTGCGGGTCAAGACCGACTCCTCGGCCGCCCTGGTCGGCACGCTCAGCGGCGGCAACCAGCAGAAGGTGGCGCTCGGCAAGTGGCTCGTCAACGAACCGCGCGTGCTCCTGCTCGAGGAGCCGACGCGCGGCGTCGACGTCCGCGCCAAGGCCGAGATCCACGCCCTGCTGCGCGGCCTCGCCGAAGAGGGCATGGGACTTCTGGTGAGCAGCTCCGAGAACGACGAGCTGCTCACGCTCTGCGACCGGATCCTCGTCATGTACCGGGGCGAGGTCGTCGCCAAGTTGTCAGCCGATGAAGCCAGCGAGGTCGAGCTGGCCCGACTCTCGGGAGGGACCGAACCTTGA
PROTEIN sequence
Length: 533
VAGTDRLMTAVRSDAAAGAHSSPAAVPGGASGVPVLEVRGVQKRYGGVRALRGADLRLARPGAVHCLIGENGSGKSTLLGVLSGQVQPDAGEVRLDGEPVSFSSPPAAVRAGIAMVSQETAIAPHLSVAENVLLGERLVRRRGRIDWPATRRRAQEVLDRLHLDYDVELPVVRLRPDQRQMVEIARAVSIDARVLILDEPTSFLSLDEVDRLFAAVRDLSANGVATIFVSHRLPELFAIAHEVTVLRDGATVSSGPIAEYTPDRIVHDMVGEAHEAPAGRTARERVETAAPPRLEAVDVADAVGVRSVTLEVAPGEIVGIAGLAGSGRSELLELIFGARAMAAGTVSVDGRPVRHHDPTAAIAAGIGFVPAERKVDGVVLTMSVFDNLDMAAAGSAAWWRRPRGRRDDDAAARVIAGLRVKTDSSAALVGTLSGGNQQKVALGKWLVNEPRVLLLEEPTRGVDVRAKAEIHALLRGLAEEGMGLLVSSSENDELLTLCDRILVMYRGEVVAKLSADEASEVELARLSGGTEP*