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scnpilot_solids1_trim150_scaffold_1820_5

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: 6081..6629

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZV9_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 49.4
  • Coverage: 174.0
  • Bit_score: 160
  • Evalue 2.30e-36
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 174.0
  • Bit_score: 160
  • Evalue 7.20e-37
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB49935.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.4
  • Coverage: 174.0
  • Bit_score: 160
  • Evalue 3.20e-36

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Taxonomy

Conexibacter woesei → Conexibacter → Solirubrobacterales → Thermoleophilia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGGCGCCCGGTCAGATCGAGATGGACGCGCTCGGCCTGGAGCTGGCGCAGGTCCGCTTCGCCAAGCTCTACCGCGAGGAGGGGCGGGCGATCCTCGAGTACGCCCTGCGGCGGGTCGAGGACCGTGAGGACGCCGCCGACGTCGTCGCCGAGACCTTCCTGGTCGCCTGGCGGCGGCTGGGTGAGGTGCCGCTGGGCGACGGGGCGCGGCTCTGGCTCTACGGGGTGGCGCGGCTGACGCTCGCCAACCTGCACCGGGCCGAGCGCCGCCGCACCCGGCTCGGGCGCCGCCTGGCGGAGTCGCTGCGCACCGAGCTGAGCACCCACGCGGCGCCGTCTGGCGAGGCGGCCGAGGTCCTGCGGGCGGTCGGCGAGCTCGGCGAGGAGGACCGCGAGCTGCTCCTGCTGGTCTCCTGGGAGGGGCTCTCGCCGGGCGAGGCGGCGCGGGTGCTCGGCACCACGGCGCTGGCGGCGCGCAGCCGCCTGCACCGGGCGCGGCGCCGGCTGCGCCGCCGGTTGGAGGAACGCGAGACGGAGGGTCTGGGATGA
PROTEIN sequence
Length: 183
MAPGQIEMDALGLELAQVRFAKLYREEGRAILEYALRRVEDREDAADVVAETFLVAWRRLGEVPLGDGARLWLYGVARLTLANLHRAERRRTRLGRRLAESLRTELSTHAAPSGEAAEVLRAVGELGEEDRELLLLVSWEGLSPGEAARVLGTTALAARSRLHRARRRLRRRLEERETEGLG*