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scnpilot_solids1_trim150_scaffold_1182_22

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(19098..19946)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DAB2_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 72.3
  • Coverage: 173.0
  • Bit_score: 260
  • Evalue 1.90e-66
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 72.3
  • Coverage: 173.0
  • Bit_score: 260
  • Evalue 6.10e-67
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA25773.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.3
  • Coverage: 173.0
  • Bit_score: 260
  • Evalue 2.70e-66

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 849
GTGCCCCTAAGCGATCTAGATCGTGGCCTCGTCGAGCGGTGCCTGGGAAAGGAGCCGGGCGCCTGGAACGACTTCGTCGACCGCTACGTCGGTTTGATCTACCACGTCATCCACCACGTCGCGCACTCGCGAAGCCGGCTGCTGAGCGAGGCCGACACCGAGGACATCGCCGCGGAAGTGCTGCTGGCCCTCGTGGACGACGACTACGACGTCCTGAGACGGTTCAAGGGCCTGAGTTCGCTGCCGACCTATCTGACGGTCATCACTCGTCGGATCTGCGTCCGGGAGATCATCCGTCGCCAGCGCGCGGCCGAGTTGGGACACGCCAACGCCCACCGCGAGATCGTCGGCGACCTTTCCGGCGAGGCCGAGGCCATCGCCACCGCCGACGAGGTGGAACGGATCCTCGACGAACTCCCGGAGAAGGAGGCCGAGGTCGTCCGATTGTATCATCTCAAGTACATGAATTACCGCCAGATCGGCAAGCAGCTTGGGATCTCGGAGAACTCGGTCGCCGCCCGCCCGTCGGAGTTGTCGATCACGACCTCGACCTGCGCCTCGCGCCGCGCGCCGGTGTTTTTGCCGCCCGCCGAGATCACGTCCTGCATCGAGGCGCCGCGGATCGCCCCCGGGCTCTGCTCGCCGAGCGCCCACAGCACCGCGTCGGTGATGTTGCTCTTGCCGGAGCCGTTCGGCCCGACGATCACGCTGACGCCGGGCGAGAACTCGAGGCTCACCCGCTCGGGGAACGACTTGAACCCCTTCATCGTGATCGATCTCAGGTACATAAGGTCAGCATTCAGGGTCGCGCCCGGTCCGGACGCCACGTCGGCGGTGGAAAACCCGTAA
PROTEIN sequence
Length: 283
VPLSDLDRGLVERCLGKEPGAWNDFVDRYVGLIYHVIHHVAHSRSRLLSEADTEDIAAEVLLALVDDDYDVLRRFKGLSSLPTYLTVITRRICVREIIRRQRAAELGHANAHREIVGDLSGEAEAIATADEVERILDELPEKEAEVVRLYHLKYMNYRQIGKQLGISENSVAARPSELSITTSTCASRRAPVFLPPAEITSCIEAPRIAPGLCSPSAHSTASVMLLLPEPFGPTITLTPGENSRLTRSGNDLNPFIVIDLRYIRSAFRVAPGPDATSAVENP*