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scnpilot_solids1_trim150_scaffold_1896_4

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(2775..3341)

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] similarity KEGG
DB: KEGG
  • Identity: 54.3
  • Coverage: 184.0
  • Bit_score: 193
  • Evalue 6.10e-47
pseudouridine synthase n=1 Tax=Patulibacter americanus RepID=UPI0003B6EE4D similarity UNIREF
DB: UNIREF100
  • Identity: 59.6
  • Coverage: 183.0
  • Bit_score: 198
  • Evalue 4.60e-48
Tax=RBG_16_Acidobacteria_64_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.0
  • Coverage: 183.0
  • Bit_score: 209
  • Evalue 3.70e-51

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Taxonomy

RBG_16_Acidobacteria_64_8_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 567
GTGTCGGAGCTGGGGGATCTGCTCGGCGGGGGCGACCCGGAGCGACCGGGGATCGTCCACCGGCTCGACAAGGACACCAGCGGCCTGATGGTGGTCGCGCGCGGGCCCGAGGCCCTGGCGGCGCTCCAGGGGGCGGTCCGCGCGCGGGAGGTCGAGCGGCATTACCTGGCGCTTGCCGGCGGGCGCCTGGCGTCCCGGACCGGGACGATCGACGCGCCGATCGGCCGCGCGACCCGCCGCCGCACCCGGATGGCGGTCGCCGGCGCCGCCTCGCGCGAGGCCCGCACCCATTTCGAGGTCCTGGAGCTGCTGCCGCGCGAGAGCTACGTCGAGGCCCGCCTCGAGACCGGCCGCACCCACCAGATCCGCGCCCACTTCGCCGCGATCGGCCACCCCCTGGTCGGCGACTCCACCTATGGCGGCAAGGACCGCTACGGCCTGGGACGCCAGTTCCTCCATGCCCACCGCCTGGCCTTCCGCCACCCACGTACCGGCGCACCGCTCGACTTCAAATCCCCGCTCCCGGCTGATCTGGCTGCGGCGCTGGAGGCGGCGCGCGGCGAGTAG
PROTEIN sequence
Length: 189
VSELGDLLGGGDPERPGIVHRLDKDTSGLMVVARGPEALAALQGAVRAREVERHYLALAGGRLASRTGTIDAPIGRATRRRTRMAVAGAASREARTHFEVLELLPRESYVEARLETGRTHQIRAHFAAIGHPLVGDSTYGGKDRYGLGRQFLHAHRLAFRHPRTGAPLDFKSPLPADLAAALEAARGE*