ggKbase home page

scnpilot_solids1_trim150_scaffold_3434_1

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(345..1163)

Top 3 Functional Annotations

Value Algorithm Source
Short chain dehydrogenase n=1 Tax=Gordonia neofelifaecis NRRL B-59395 RepID=F1YIT4_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 43.0
  • Coverage: 256.0
  • Bit_score: 189
  • Evalue 5.30e-45
Short chain dehydrogenase {ECO:0000313|EMBL:EGD55472.1}; TaxID=644548 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia neofelifaecis NRRL B-59395.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.0
  • Coverage: 256.0
  • Bit_score: 189
  • Evalue 7.40e-45
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 42.5
  • Coverage: 261.0
  • Bit_score: 181
  • Evalue 3.40e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gordonia neofelifaecis → Gordonia → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 819
TTGACCGAGGGGAAGAGCCTGATCACGCTGGAGCCCGCCTTCGAGCGGGCGGTCGTCACCGGCGCCGGCAGCGGCCTCGGCCGCGGGATCGCGCTGGCGCTGACCGCGGCGGGGGTCGACGTGGTGGCGATGGGCAGGCGCGAGGAGCCGCTGGCCGAGACCGCCGCGATCGCGCCCGGCCCGGGGACCGTCACCGTCGCCCCCGGCAACATCCGCGACGAGGAGGACGTCGACCGGGTCTTCACCCTCGCCGAAGCCGACGGGCCGCCGCAGATGCTCGTCCACGCGGCCGCCGGCGCCTTCCACGCGCCCGCCGAGCAGATCAGCGCCAACGGCTTCCGCGCCGTCGTCGACACCGGGCTGAGCGGCGCCTTCCTCGTCCTGCGGCGCTGGGCGCGACCGCTGATCGAGGCGCGCCTGCCGGGCGTCGCCACCGCCATCTCCAGCGCCCTCGGCGCCCGCGAGGTCCCCGGCGCCGCCCACTCCAGCGCCGCCAAGGCTGGCCTCGAGGCGCTGACCCGCTCGCTCGCCGTCGAGTGGGGCCGCTATGGCCTGCGCATCAACGTCGTCGCCCCCGGCGCGGTCTCCACGGAAGGGGCCGACGCCGGCACCTGGGACGCCGAAGAGTTCCGCCGCCACGCCCTCGAGAACATCCCCCTCGGCCGCTTCGGCGAGGTCGACGAGGTCGTCTCCGCCGCCATGCTCCTCCTCAGCCGCCAAGGCGAATACATCACCGGCAGCTCGATCTACGTCGACGGCGGCTGGCGCCTCGGCGACTGGCCGTTCATGTCCGAGCCCCCCTCGAGCTGGGCCGAGTAG
PROTEIN sequence
Length: 273
LTEGKSLITLEPAFERAVVTGAGSGLGRGIALALTAAGVDVVAMGRREEPLAETAAIAPGPGTVTVAPGNIRDEEDVDRVFTLAEADGPPQMLVHAAAGAFHAPAEQISANGFRAVVDTGLSGAFLVLRRWARPLIEARLPGVATAISSALGAREVPGAAHSSAAKAGLEALTRSLAVEWGRYGLRINVVAPGAVSTEGADAGTWDAEEFRRHALENIPLGRFGEVDEVVSAAMLLLSRQGEYITGSSIYVDGGWRLGDWPFMSEPPSSWAE*