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scnpilot_solids1_trim150_scaffold_2515_6

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: 5967..6626

Top 3 Functional Annotations

Value Algorithm Source
Putative TetR family transcriptional regulator n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1BDU8_RHOOB similarity UNIREF
DB: UNIREF100
  • Identity: 45.2
  • Coverage: 197.0
  • Bit_score: 177
  • Evalue 1.30e-41
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 45.2
  • Coverage: 197.0
  • Bit_score: 177
  • Evalue 4.00e-42
Putative TetR family transcriptional regulator {ECO:0000313|EMBL:BAH47151.1}; TaxID=632772 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.2
  • Coverage: 197.0
  • Bit_score: 177
  • Evalue 1.80e-41

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Taxonomy

Rhodococcus opacus → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 660
GTGACGCGACCACGGAGGGGACAGCCGAGCGCCCGCGCGAAGATCCTCGCGGCGAGTCGCAAGCTGTTCGTGCGGCGCGGCTTCGCGCAGGTCTCGATCGGCGACATCGCCCGCGGCGCCGGGGTCGTTCGCGCCACCGTCTACAACAACTTCGACGACAAGCAGGACATCCTCGCCGCGATCATCGCCGACTACATGACGGGATACGCGCAGATCGCGCAGCGGCTGCGGGCGAGCGCCCGCCCCGGTCAGACCTCCTTCAGCCTGATCCAGGAAATGGTCCGCGAGGCGCTGGCCTGGCGGGTCGAGAACGCCGACCTGCGGCCGCTCGTCGCCGTTGCCCGCGGCTCGCGCAGCAGCGGCTGGGACCAGGCCAACAAGGCCGCCGACGACGCCATGCTGGGATGGATCCTCACCGTCCACGCGGCCGACGAGGCCGCCGGCCTGATCCGCGACGACATCGACCTCGAGTTCGGCGTCCGCGCCGCCTACGCGATGATCGAGTCGGTCCTCTCCTCCTTCGACGTCGCGGCCGGCAAGGAGCAGATCGACGAAGCCGCCCATCAGCTGGCGCTGCTCCACTGGTACTCGATCTGCAAGGTCGATCCGGGCGAAGCCCCCGAGAGCCCCCTCGGCCGGCGCCTCGCCGACGACCAATAG
PROTEIN sequence
Length: 220
VTRPRRGQPSARAKILAASRKLFVRRGFAQVSIGDIARGAGVVRATVYNNFDDKQDILAAIIADYMTGYAQIAQRLRASARPGQTSFSLIQEMVREALAWRVENADLRPLVAVARGSRSSGWDQANKAADDAMLGWILTVHAADEAAGLIRDDIDLEFGVRAAYAMIESVLSSFDVAAGKEQIDEAAHQLALLHWYSICKVDPGEAPESPLGRRLADDQ*