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scnpilot_solids1_trim150_scaffold_2319_3

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(2260..2913)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI000379FD7B similarity UNIREF
DB: UNIREF100
  • Identity: 30.2
  • Coverage: 212.0
  • Bit_score: 70
  • Evalue 2.80e-09
collagen triple helix repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 44.2
  • Coverage: 77.0
  • Bit_score: 65
  • Evalue 2.20e-08
Collagen triple helix repeat-containing protein {ECO:0000313|EMBL:AEM71212.1}; Flags: Precursor;; TaxID=886377 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.2
  • Coverage: 77.0
  • Bit_score: 65
  • Evalue 9.80e-08

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Taxonomy

Muricauda ruestringensis → Muricauda → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 654
ATGAATCGCATCCGCGGGAAGCTCACCTACTCGAACGTCATCTCCACCCTCTGTCTCCTCCTGCTGTTGGGCGGCGGGACCGCCTATGCGGCGACGCAGTTGCCGAAGAACAGCGTCGGCACGAAGCAGATCAAGAAAGGTGCCGTCACCCCGATCAAGTTGAGCACCGCCTCGAAGGCGGCGCTGACCGGCCCGCAGGGCCCGATCGGTCTGCAAGGGCCGAAGGGCGACCAAGGTGAGAGAGGGGAAAAGGGCGAACAGGGGCCACGGGGTGAACAGGGCCCGGGCGCGCTCTCGCTCGAAATCGCGGTGCCGACGACGTCGACGAAGGTCGGCACCTTCGGCGGCATCGAACTGAGCTCGGCCTGCAGCCCCGGGCTCGGGGGTTCTTCCCAGATCGGCCTCAAGGTGGCCGGCGGCGCCAGGTTCGAAGCGTTCGGCACCTCGAGCAACAACGAAGAATCGAAGGTCTTCGCGGTCAATTACCACACCTTCGGCCTGACCTTCTTCGGCAGCGGCCCCGAACACGCGGTGACGGTCGACCTCGACGCGAGGCCGAGCGGCACCTCTGCCCCCTGGACCCGGCTCGACCTCCGCGTCGACGCGGCCGACTGCATCCTGGGTGGGACCGTGATCGAATCACAGGCGGCCTGA
PROTEIN sequence
Length: 218
MNRIRGKLTYSNVISTLCLLLLLGGGTAYAATQLPKNSVGTKQIKKGAVTPIKLSTASKAALTGPQGPIGLQGPKGDQGERGEKGEQGPRGEQGPGALSLEIAVPTTSTKVGTFGGIELSSACSPGLGGSSQIGLKVAGGARFEAFGTSSNNEESKVFAVNYHTFGLTFFGSGPEHAVTVDLDARPSGTSAPWTRLDLRVDAADCILGGTVIESQAA*