ggKbase home page

scnpilot_solids1_trim150_scaffold_3009_2

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(968..1408)

Top 3 Functional Annotations

Value Algorithm Source
Protein containing DUF892 n=1 Tax=Rhodopirellula baltica SH28 RepID=K5CYW3_RHOBT similarity UNIREF
DB: UNIREF100
  • Identity: 39.7
  • Coverage: 78.0
  • Bit_score: 60
  • Evalue 1.50e-06
Protein containing DUF892 {ECO:0000313|EMBL:EKJ99321.1}; TaxID=993517 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica SH28.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.7
  • Coverage: 78.0
  • Bit_score: 60
  • Evalue 2.10e-06

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopirellula baltica → Rhodopirellula → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 441
ATGTCATTTCTAAAACGTCCCGCGACCGGGGCGCCGAACGGCCCTCGCGGCGACACCCCGAGCCGCCTCAAGGACACCGCGCTCGGCCTCGGCGGTGCCAACCCCGCCGGCTTCTTCGCCGCCCAGCCCGATCCGCCGCCGAAGCCGGCGGGCTTCGCCTTCGCCTTCGAGCAGCTCGAGGTGGGCGGCTACGCGCTGCTCGCGCGGGTCGCCGCGCGAGCGGGCGACGAGGACACGGTCGCGCTCGCCGAGGAGCTGGCGCGCGAGGAGCGCACCGCGGCGGCGGCCGTCGGGGGCCTGGGACGGGGCGCCGGCGACGCTCGGCGACCTCGACATCGCGCCGACGGGCGGCGTCCAGGCGTAGGGCGGCCCGCCCTCGACCGGACGCTCCGATCGCACAGCGTCCGCCCGGTCACGAACCATTGCCCCTTCGCGCCGTAA
PROTEIN sequence
Length: 147
MSFLKRPATGAPNGPRGDTPSRLKDTALGLGGANPAGFFAAQPDPPPKPAGFAFAFEQLEVGGYALLARVAARAGDEDTVALAEELAREERTAAAAVGGLGRGAGDARRPRHRADGRRPGVGRPALDRTLRSHSVRPVTNHCPFAP*