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scnpilot_solids1_trim150_scaffold_4226_1

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(103..1779)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.2
  • Coverage: 561.0
  • Bit_score: 466
  • Evalue 4.90e-128
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B42552 similarity UNIREF
DB: UNIREF100
  • Identity: 47.8
  • Coverage: 563.0
  • Bit_score: 469
  • Evalue 5.40e-129
  • rbh
GAF sensor signal transduction histidine kinase similarity KEGG
DB: KEGG
  • Identity: 38.7
  • Coverage: 555.0
  • Bit_score: 311
  • Evalue 4.50e-82
  • rbh

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Taxonomy

Patulibacter medicamentivorans → Patulibacter → Solirubrobacterales → Thermoleophilia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1677
ATGTCCCTTACCGATCGAGATGGCGAGGACCAGCGGGACGACCGCCTTCCCCGCCTCATCGAGGTCGGCTCCTCGCTGCTCGCGGAGCTTGACCTGGAGGCCGTCCTGCGCTCCGTCGTCGAGGCGGGGCGCGAGCTGACCGGCGCGCGGTACGCGGCCCTCGGGGTCCTCGACGGCGACCGGCAGGAGCTCGAGCGCTTCATCTACCTCGGCATCGACGACGAGACGCGCCGCGACATCGGGCCGCTGCCGCGCGGGCGCGGGGTGCTCGGCGAGCTGATCCGCGATCCGCGCCCGCTCCGCCTCCCCGACGTCGAAGCGCACCCGCACGCCTACGGCTTCCCGCCCGGCCACCCGGCGATGCACACCTTCCTCGGCGTGCCGATCACGATCCGCGGCGAGGCCTTCGGCAACCTCTACATGACCGAGAAGCGGGGCGGGGTGGAGTTCGACGAGGCCGACGAGGAGGCGGCGCGGGCGCTCGCCAACTGGGCGGCGATCGCGATCGAGAACGCCCGGCTCTACACCACGCTGAGCGCCCGCGAGGCGGAAACCGAGCGGGCGCTGCGCCGCGCCGAGACCTCGGCCGACATCGCCCGCACGGTCGGCGGCGTGACCGACGTCGACCGCGTCCTCGACCTGATCGTGAAGCGCGGCCGCGCGTTGATCGAGGCCTGCACGGTGCTGGTGCTGCTGCGGAAGCGGGGGCGGCTCGTCGTCGCCGCGGGGGCGGGCCGGGTCGGCCCCGGGCTCGAGGAGCTGACGATCCCGACCGAGGACTCCGTCTTCCAGGCGGCGATGCAGGAACGCGTCGCCCAGCACCTGGAGCGGGGGGCGCCGCCGTCGGAGGCGCGGATCCGCGAGCGCCTCGGCGCCGAGGCGGCGCTGGTGGTGCCGCTGCAGTTCCGCGGCCGGGCGGTCGGCACGCTGGTGGCGCTCGACCGCGAAGCGGGCGGTGATTTCGACGACGAAGACCTGCGGCTGCTGCAGGCCTTCGCCGCCACCGCGGCGATCGCGGTCGGCACCGCCCAGTCGGTCGAGGCCGGGCGGCTGCAGCAGCAGGTGGAGGTCGCCGAGGACGAGCGGCAGCGCTGGGCGCGGGAGCTCCACGACGGGGTCCTCCAGTCGCTCGCGGCGGTGCGGATCACCCTCGCCGCGGCCCTGCAGGGAAGCGGTGAGGACCGTGACGCGCAGATCGAGCGCGCCGCCGAAGCGACGGTCGAAGGGCTGGAGGAGCAGATCACCGAGCTGAGCCGGCTGATCAACGACCTGCGGCCGGCCTCGCTCGAGCGCCTCGGCCTGGCGGGCGCGCTGGAGGCGCTCGCCGAGGAGTCGGCGAACCGCGGCGACTTCGAGGTCGCCACCGAGCTCGACCTCGGCGGCGAGCTGTCCGGCGACGAGGAACGGGCCGTCTACCGGCTCGTCCAGGAGGCGCTGACCAACGTCGTCAAGCACGCCGGCGCCGAACACGCCTGGGTCCTCGTCCGCGACGACGACACCACGGTGGAGATCGAGGTGCGCGACGACGGCAAGGGCTTCGACCCGGCCTTAGGCCCCGGCCGCGGCCTCCTCGGCATGCGCGAGCGGGTCGAGATGCTGGGCGGCACGATCGAGATCGACTCCCGGGCCGGAGGCGGGACGAAGGTCAGCTCGACCCTGCCGCTGCGCTTGGGGTAG
PROTEIN sequence
Length: 559
MSLTDRDGEDQRDDRLPRLIEVGSSLLAELDLEAVLRSVVEAGRELTGARYAALGVLDGDRQELERFIYLGIDDETRRDIGPLPRGRGVLGELIRDPRPLRLPDVEAHPHAYGFPPGHPAMHTFLGVPITIRGEAFGNLYMTEKRGGVEFDEADEEAARALANWAAIAIENARLYTTLSAREAETERALRRAETSADIARTVGGVTDVDRVLDLIVKRGRALIEACTVLVLLRKRGRLVVAAGAGRVGPGLEELTIPTEDSVFQAAMQERVAQHLERGAPPSEARIRERLGAEAALVVPLQFRGRAVGTLVALDREAGGDFDDEDLRLLQAFAATAAIAVGTAQSVEAGRLQQQVEVAEDERQRWARELHDGVLQSLAAVRITLAAALQGSGEDRDAQIERAAEATVEGLEEQITELSRLINDLRPASLERLGLAGALEALAEESANRGDFEVATELDLGGELSGDEERAVYRLVQEALTNVVKHAGAEHAWVLVRDDDTTVEIEVRDDGKGFDPALGPGRGLLGMRERVEMLGGTIEIDSRAGGGTKVSSTLPLRLG*