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scnpilot_solids1_trim150_scaffold_3811_1

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(620..997)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Sporichthya polymorpha RepID=UPI00036DEAD8 similarity UNIREF
DB: UNIREF100
  • Identity: 37.4
  • Coverage: 123.0
  • Bit_score: 87
  • Evalue 1.30e-14
Winged helix family two component transcriptional regulator {ECO:0000313|EMBL:EMF00195.1}; TaxID=1223523 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces mobaraensis NBRC 13819 = DSM 40847.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.2
  • Coverage: 123.0
  • Bit_score: 85
  • Evalue 5.30e-14
two-component response transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 36.0
  • Coverage: 125.0
  • Bit_score: 83
  • Evalue 5.90e-14

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Taxonomy

Streptomyces mobaraensis → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 378
ATGACCAAGATCCTGGTCGCCGACGATTCCGAGACGATCCTGCTGCTGATGCGCACGCGGCTGGAGCTGGCCGGCTACGAGGTCGAGGCCGCGGTCGACGGCCAGGAGGTCGTCGAGCGCGTCGACCCGAACTCCGACGACGGCCCCGACCTGCTCCTCCTCGACGCGATGATGCCGCGCAAGTCCGGCATCGACGCCCTGCGCGAGCTGCGCGCCGCCGGCGTCGAGACCCCGGCCCTGATCGTCAGCGCCCACCAGACCCCCGACGACGCCGACGCCCCCGCCGACCTCGAGATCAGCGGCTACCTGACCAAGCCGATCGACTTCGACGCCCTCCTCGGCGCGGTCGCCGAGCTGACCGCGAAGAAAGCCGCCTAG
PROTEIN sequence
Length: 126
MTKILVADDSETILLLMRTRLELAGYEVEAAVDGQEVVERVDPNSDDGPDLLLLDAMMPRKSGIDALRELRAAGVETPALIVSAHQTPDDADAPADLEISGYLTKPIDFDALLGAVAELTAKKAA*