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scnpilot_solids1_trim150_scaffold_3885_2

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(1652..1885)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 69.7
  • Coverage: 76.0
  • Bit_score: 114
  • Evalue 1.10e-23
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / similarity UNIPROT
DB: UniProtKB
  • Identity: 69.7
  • Coverage: 76.0
  • Bit_score: 114
  • Evalue 5.10e-23
DNA-directed RNA polymerase subunit omega n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FE13_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 69.7
  • Coverage: 76.0
  • Bit_score: 114
  • Evalue 3.60e-23

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Taxonomy

Conexibacter woesei → Conexibacter → Solirubrobacterales → Thermoleophilia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 234
ATGATCAAACCACGCGTAGACAAGCTTCTCGATCACTCCGACTCCCATTACGCCGCCGTTGTCGTGTCGGCGAAGCGGGCGCGGCAGATCAACAGCTACTTCCACAACCTCGGCGAGGGTGGCTTCGGCGAGTACCCGCCCCCGATGGTGGAGACGAACACCGAGGGCAACTACCTCACGATGTCGCTGGAAGAGCTGGCCGAGGGCAAACTCAAATACGAGTACCGCAGCTAG
PROTEIN sequence
Length: 78
MIKPRVDKLLDHSDSHYAAVVVSAKRARQINSYFHNLGEGGFGEYPPPMVETNTEGNYLTMSLEELAEGKLKYEYRS*