ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_solids1_trim150_scaffold_4017_1

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(190..1014)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Nocardiopsis gilva RepID=UPI0003476C33 similarity UNIREF
DB: UNIREF100
  • Identity: 39.0
  • Coverage: 249.0
  • Bit_score: 180
  • Evalue 3.20e-42
acetoacetate decarboxylase protein similarity KEGG
DB: KEGG
  • Identity: 34.8
  • Coverage: 256.0
  • Bit_score: 162
  • Evalue 2.20e-37
Acetoacetate decarboxylase protein {ECO:0000313|EMBL:AGS26558.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.8
  • Coverage: 256.0
  • Bit_score: 162
  • Evalue 9.70e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium etli → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
ATGGACAACGCCGCTTTCGCCGCCTCCTACTCGCAGCCGATCGGGCCCGGCAGCGCCTACGCGCCGCCGCCCTACCTCTACCGCGACGTCGAGGACTGCTTCATCGTCTACGAGGCCGATCGCGCGGGCGTGGAATCGCTGCTGCCGCCGGGGCTCGAGATCGCCGACGAGGTGCCGACCTGCATCGCCTGGGCCCGCTGGGTGCCGTACTCGACCTTCGGCCAGTACCACGAGGCCTACGTGATGGTGCGCGCCTCCTTCGCCGGCCAGACCTACCTCTACCAGCCGTTCATCCTCGTCGACAACGAGATCCCGCTCACCGCCGGCCGCGAGATCTGGGGCTACGCGAAGAAGCTGGCCGTCTTCGAGCGCAACTGGGGCGGCGGCGAGGTCCCCTACGGCGAGCAGATGACCTTCACCGTGCAGCGCCCGGCGGGGGTGCCGCTGATGAGCGCGACGATGGTCGCCGACCGCCTCGCCGACCCGGCCGAGCTGGAGGACCTGCCGGTCCTCTCGACCCGGATCATCCCCAACTCCGAGCCCGGCAAGCGCCCCTCGGTGGCCGAGCTCGTCCGCCTCGACGTCCCGGCCACCCTCCACAAAGCCCAGGACGGCACGCCCCGCCTCTTCGCCGGCCGCGGCTCCCTCTCGTTCCCGACCGTCTCGAGCGTCGACCCCTGGCATTTGCTGGCCCCGAAGCGGATCCTCGAGTGCTACTTCGGGGTCTACGACTTCGATCTGCCGCATGGGCGGGTGATTCACGACTACCTGAAGGAAGACGAGATCTGGGAGTCCGTCGAGAAGGGGAGGTTGGCGGCGGCGTAG
PROTEIN sequence
Length: 275
MDNAAFAASYSQPIGPGSAYAPPPYLYRDVEDCFIVYEADRAGVESLLPPGLEIADEVPTCIAWARWVPYSTFGQYHEAYVMVRASFAGQTYLYQPFILVDNEIPLTAGREIWGYAKKLAVFERNWGGGEVPYGEQMTFTVQRPAGVPLMSATMVADRLADPAELEDLPVLSTRIIPNSEPGKRPSVAELVRLDVPATLHKAQDGTPRLFAGRGSLSFPTVSSVDPWHLLAPKRILECYFGVYDFDLPHGRVIHDYLKEDEIWESVEKGRLAAA*