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scnpilot_solids1_trim150_scaffold_4345_2

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(1526..1951)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1075090 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia amarae NBRC 15530.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.5
  • Coverage: 137.0
  • Bit_score: 102
  • Evalue 6.20e-19
hypothetical protein n=1 Tax=Saccharomonospora halophila RepID=UPI0003663D96 similarity UNIREF
DB: UNIREF100
  • Identity: 42.4
  • Coverage: 139.0
  • Bit_score: 111
  • Evalue 7.20e-22
PilT domain-containing protein; K07065 similarity KEGG
DB: KEGG
  • Identity: 35.7
  • Coverage: 126.0
  • Bit_score: 81
  • Evalue 3.30e-13

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Taxonomy

Gordonia amarae → Gordonia → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 426
GTGACGCTGATCTGCGACGCGGCGCCGCTCGTCGCGCTCGCCGACCGGGCCGAGCCGCAACGTGACCGTCTTCTGGAGCTGGTCCGCCACGAGCGCGGCGATCTGATCGTCCCGGCACCGGTCGCCGCCGAGGTCGATTACATGCTCGGGGTCCGCCTCGGGCAGGCCGCCCGCCGTGCCTTCCTCGAGGATCTTGCCGCCCGCCGTTTCGAGGTGGCGTGCCTGGCGCCCGGCGACTACGCCACCGTGGCAAGCCTCGACGCCCGCTATGCCGACCTCGAGCTCGGCCTCGCCGACTGCTCGGTGGTCGTCCTGGCCGCGCGCTTCGACACCCGCCGCCTGTTGTCCTTCGACGAGCGCGACTTCCGCCCGGTCGAGCCGCTGCAGGGCGGTGCCTACCAGCTGCTGCCCGCTGACGAGGGCTGA
PROTEIN sequence
Length: 142
VTLICDAAPLVALADRAEPQRDRLLELVRHERGDLIVPAPVAAEVDYMLGVRLGQAARRAFLEDLAARRFEVACLAPGDYATVASLDARYADLELGLADCSVVVLAARFDTRRLLSFDERDFRPVEPLQGGAYQLLPADEG*