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scnpilot_solids1_trim150_scaffold_4354_2

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: 1044..1649

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI0003762EF6 similarity UNIREF
DB: UNIREF100
  • Identity: 42.1
  • Coverage: 190.0
  • Bit_score: 153
  • Evalue 1.80e-34
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 40.7
  • Coverage: 204.0
  • Bit_score: 135
  • Evalue 2.10e-29
TetR family transcriptional regulator {ECO:0000313|EMBL:AGM02783.1}; TaxID=1156913 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis orientalis HCCB10007.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.7
  • Coverage: 204.0
  • Bit_score: 135
  • Evalue 9.40e-29

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Taxonomy

Amycolatopsis orientalis → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGGCCGGGAAGAAAAGACTCAGTGCGGCGGAGCGGCGGGAGCGGATCGTCGCCGCGGCCACCGGCCTGATCGCCGGGCGCGGGTACGCCGACGCGCCGATCGACGCGATCGCCCGGGACGCGGGCGTGTCGCCGCCGGTCCTCTACGACCACTTCGCCTCCAAGCTCGCCCTCTACGAGGCGGTGCTCGACTCGCACTTCGCCAACCTGCGCGCCATCTGGGGCGCGCGCTTCCCCGCCGCCGAGCTGTCGGCCGAGTCGGTCGCCGCCTCCTTCGACGCCTGGTTCGCCTACGTCGAAGCGAACCCCGACGCCGCCCGCATCCTCTTCCGCGAACCCGCCGACGCCGATGCCGCCGCCATCCACCGCGCCGTGTCCGAGCGCAGCCGCGCCCTGGTCCTGCAGCCGCTGCTCGGCATGTCCGCGAGCGCGCCGCTCACGGGCACCGACGCCGACCTCGAGATGACCTGGGTCGTCCTCCGCGGCGTCCTCCAGGGCCTCGCCCTCTGGTGGGTCGACCATCCCGACGTCCCCCGCGAACGGGTGGTCGCCACCGCCCTCGGGTCGCTCTGGCACGGCTGGGGCAGCTTGCTGGGCGGTGCCTAA
PROTEIN sequence
Length: 202
MAGKKRLSAAERRERIVAAATGLIAGRGYADAPIDAIARDAGVSPPVLYDHFASKLALYEAVLDSHFANLRAIWGARFPAAELSAESVAASFDAWFAYVEANPDAARILFREPADADAAAIHRAVSERSRALVLQPLLGMSASAPLTGTDADLEMTWVVLRGVLQGLALWWVDHPDVPRERVVATALGSLWHGWGSLLGGA*