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scnpilot_solids1_trim150_scaffold_4354_4

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(2464..3009)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Actinomadura flavalba RepID=UPI00035D9D2F similarity UNIREF
DB: UNIREF100
  • Identity: 66.9
  • Coverage: 178.0
  • Bit_score: 230
  • Evalue 1.40e-57
TetR family transcriptional regulator {ECO:0000313|EMBL:AJK53015.1}; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.8
  • Coverage: 182.0
  • Bit_score: 225
  • Evalue 6.20e-56
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 65.7
  • Coverage: 178.0
  • Bit_score: 224
  • Evalue 3.10e-56

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Taxonomy

Amycolatopsis lurida → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGGCCCCGCCGACCCGCACCCCCCGCAGCCGCTGGATCGAGGAGGGCCTGCGGATGCTCGCCGAGGGCGGGCCCGAGGCGGTCCGGATCGAGCCGCTGGCGGCGCGCCTCGGGGTCAGCCGCGGCGGCTTCTATTGGCATTTCGACGACCGCGGGGCGCTGCTCGAGGAGATGCTCGACAGCTGGGAGCGCGAGAGCGTCGGCCGGGTCCTCGACCGCTACCAGGAGGGCGACGACCCGCGCGAGAGCGTGCGCCGCGCCGGCGCCCTCACCTTCTCCGACCGCCTGCTGCCGATCGACCTGGCGGTCCGCGACTGGTCGCGCCGCGACGCCGCGGTGGCCGCCCGCCTGCGCCGCGTCGACAACCAGCGCATGGACTTCCTCCGCGCCCGCTTCGCCGAATTCGTCGACGACGAGGCGGAGGTCGAGGCCCGCGCGATGCTCTCCTTCTCCCTGCTGATCGGCAACCACTTCATGGCCGCCGACCACGGTCCCCGGCCCCGCTCCGAGGTGCTGGAGCTGGCCGCCGCGCACCTCCTCGCCTAG
PROTEIN sequence
Length: 182
MAPPTRTPRSRWIEEGLRMLAEGGPEAVRIEPLAARLGVSRGGFYWHFDDRGALLEEMLDSWERESVGRVLDRYQEGDDPRESVRRAGALTFSDRLLPIDLAVRDWSRRDAAVAARLRRVDNQRMDFLRARFAEFVDDEAEVEARAMLSFSLLIGNHFMAADHGPRPRSEVLELAAAHLLA*