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scnpilot_solids1_trim150_scaffold_6260_2

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: 1008..2288

Top 3 Functional Annotations

Value Algorithm Source
serine hydroxymethyltransferase; K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] similarity KEGG
DB: KEGG
  • Identity: 78.7
  • Coverage: 422.0
  • Bit_score: 661
  • Evalue 1.40e-187
  • rbh
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 422.0
  • Bit_score: 661
  • Evalue 6.10e-187
Serine hydroxymethyltransferase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYT5_RUBXD similarity UNIREF
DB: UNIREF100
  • Identity: 78.7
  • Coverage: 422.0
  • Bit_score: 661
  • Evalue 4.30e-187
  • rbh

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Taxonomy

Rubrobacter xylanophilus → Rubrobacter → Rubrobacterales → Rubrobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1281
ATGGCCGACCTGCCCGAGAACTTCCAGACCGCCCCGCTGAGCGAGGTCGATCCCGAGATCGCGACCGTCCTCGACCGCGAGCTGCGCCGTCAGCAGCGGACGCTGGAGATGATCGCCTCGGAGAACTTCGTCCCCCAGGGGGTGCTCGAAGCGGTGGGCTCGGTGCTGACCAACAAGTACGCCGAGGGCTACCCGGGCCGCCGTTACTACGGTGGCTGCGAGGAGGTCGACGTCGCCGAGCAGCTGGCGATCGACCGCGCCAAGGCGCTCTTCGGCGCCGAGCACGTCAACGCGCAGCCGCACGCCGGCGCGCAGGCCAACAACGCCGTCTACTTCGGGCTGCTCGAACCGGGCGACACGATCCTCGGCCTCGCCCTCGACCACGGCGGCCACCTCAGCCACGGGATGAAGATCAACGTCTCCGGCAAGCTCTACAACCCGGTCGCCTACCACGTGCGGCGCGAGGACTACTGGGTCGACATGGACGAGGTCGCGAGCCTCGCCGCCGAGCACAAGCCGAAGATGATCGTCGCCGGCTGGTCCGCCTACCCGCGCCAGCTCGACTTCGCCGCCTTCCGCGAGATCGCCGACTCGGTCGGCGCCCTGCTGATGGTCGACATGGCCCACTTCGCCGGCCTCGTCGCCGCCAACGAGCACCCGAGCCCGGTGCCCTACGCCGACGTCGTCACCACCACCGTCCACAAGACGCTGGCGGGACCGCGCAGCGGCATGATCTTCAGCAAGGCCGAGCACGCCAAAGCGATCGACAAAGCGATCTTCCCCGGCCAGCAGGGCGGGCCCTTGATGCACACGATCGCCGCCAAGGCGGTGGCGATGAAGATCGCCGCCTCGGCGCCCTTTGCCGCGCGCCAGCGCCAGACCATCGCCAACGCCCGCGCGCTCGGGATCGGCCTGGAAGCCAACGGCATCCCGGTCCTCACCGGCGGCACCGACGTCCACCTGGTCCTCGTCGACCTCACCCCGACCGGCCTCGACGGCCAGACCGCCGAGGACCGCCTCGAGGCGGTCGGCATCACCGTCAACCGCAACGCGATCCCCTTCGACGAGCGCCCGCCGATGAACCCCTCGGGCCTCCGCATTGGTACCCCGGCCCTCACCACCCGGGGCATGAAGGAGGAGGAGATGGAGGAGATCGCCGCCGTGATCGCCACCGCCCTCGGCCCCGACTTCGAGTCCGAGAAGGCCTCCCTCGCCGAACGCACTGGCGCCCTGATGGACCGCCACCCGCTGTACCCGCAGCTCTCGCCGACGGTCGTCTGA
PROTEIN sequence
Length: 427
MADLPENFQTAPLSEVDPEIATVLDRELRRQQRTLEMIASENFVPQGVLEAVGSVLTNKYAEGYPGRRYYGGCEEVDVAEQLAIDRAKALFGAEHVNAQPHAGAQANNAVYFGLLEPGDTILGLALDHGGHLSHGMKINVSGKLYNPVAYHVRREDYWVDMDEVASLAAEHKPKMIVAGWSAYPRQLDFAAFREIADSVGALLMVDMAHFAGLVAANEHPSPVPYADVVTTTVHKTLAGPRSGMIFSKAEHAKAIDKAIFPGQQGGPLMHTIAAKAVAMKIAASAPFAARQRQTIANARALGIGLEANGIPVLTGGTDVHLVLVDLTPTGLDGQTAEDRLEAVGITVNRNAIPFDERPPMNPSGLRIGTPALTTRGMKEEEMEEIAAVIATALGPDFESEKASLAERTGALMDRHPLYPQLSPTVV*