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scnpilot_solids1_trim150_scaffold_6352_5

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(5547..7142)

Top 3 Functional Annotations

Value Algorithm Source
translation elongation factor n=1 Tax=Patulibacter americanus RepID=UPI0003B634A8 similarity UNIREF
DB: UNIREF100
  • Identity: 50.9
  • Coverage: 532.0
  • Bit_score: 435
  • Evalue 6.30e-119
  • rbh
selenocysteine-specific translation elongation factor SelB; K03833 selenocysteine-specific elongation factor similarity KEGG
DB: KEGG
  • Identity: 41.3
  • Coverage: 491.0
  • Bit_score: 297
  • Evalue 6.40e-78
Tax=RBG_16_Actinobacteria_64_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 38.3
  • Coverage: 587.0
  • Bit_score: 312
  • Evalue 1.10e-81

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Taxonomy

RBG_16_Actinobacteria_64_13_curated → Rubrobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1596
GGCACGGCCGGTCACATCGACCACGGCAAGACGGCGCTGGTGCGGGCGCTGACGGGTCGGGACACGGACCGGCTCGCGGAGGAGCGGCGGCGGGGGATGTCGATCGAGCTCGGCTATGCGGAGCTCGCGCTCGGGGAGCGGCGGCTGAGCCTCGTCGACGTGCCCGGGCACGAGCGCTTCGTGCGGACGATGATCGCCGGGGCGACCGGGATCGACCTCTTCCTGTTGGTGGTGGCCGCCGACGATGGCGTGATGCCGCAGACGCGGGAGCACCTCGCGGTGCTGCGGGCGCTGGGGGTCGATGCGGGGGTCGTGGCTCTGACCAAGGTGGACCTCGTCGACGGGCCGGATCGGGGGCGGGTCGCGGGCGAGCTGGGCGAGCTGCTGCCGGGAGCGCCGATCGTCGCGGTGAGCGCGCGGAGCGGGGAGGGGATCGACGAGCTGCGGGCGCGGTTGCTCGACGTCGCCGAGCGCGTCGATGCGGCTCGCGACGCCGGTGTCGAGGGGCCGCCGATCGGGTCCCGAGGGGCTCTTCCGCCGGCAGTCGGTCGAGTTGCGGGACCGGCGTCGCAGGCCCGGCGCGAGGCCGCGGCCGTCGGTGGGCCGGCGGATCGGGACGACCCGGTCCTCCATGTCGACCGGGTATTCACCGTCGCCGGGCACGGGACGGTGGTGACCGGGACGCTCTGGTCGGGGAGTTTGCGGCGAGGGGACAGGGTCGTCGTCCTCCCCGGTGGGAAGGAGGTGCGGATCCGCTCGATCGAGAGCCACGATTGCTCGCTCGACGTCGTCGGGCCGCGGCGGCGCGTGGCGCTCAACCTGGCCGGGCTGCGGCGCGAGGAGATCGGGCGCGGGGACGTCGTCACTGTGGCCGGAACGGTGCTCGCGCCGACCTACCGGCTCGACGTGGCGCTCGACGGGGAGGCGCGAGCGGTGCTCGACGAGCGCCGCGTCCAGGTCCACCACGGCACCCGCGAGGCGCCGGCGCGTGTCATCGACCTCGGCGACGGCACCGCGCAGCTGCGGCTCGAGCAGCCGCTCCTGGCCCGGCGCGGCGACCGCGTGGTGGTCCGGCGGATCGCGCCGCCCGACACGCTTGGCGGGGCCATCGTCGTCGACCCGGCCCCACGGCGACATTCGGACCGGTCAGGAATGTCCGTGTCGATTTCTGGTTGCTCAGCACCCAAAAGTCGACGAGCGTCCGAGGGGACCGGGGCGCCGGGGCCCGGGCCGCTCGCCCGGCGCGTTCTCGGCGAGCTCGAGGCCGATGGGGAACGGCCGCGGACGCCGGCGAAGCTGTCGGAGGACCTCGGGGAGCCGCGGCGGGAGGTGGAACGGGCTGTCGGCGAGCTGGTCGACGCAGGGACCGCGGTGCGGTTGAAGGCCGACGTCGTCTACCCGACCGCGGAAGCAGAGCGGCTCGCCGAGGCGGTGGTGGCGCTGGTCGCTCGCGAGGGGTCGACGAGCATCGGCGAGGTTCGCGACGCGCTGGGGCTCAGCCGCAAGTACGCGCAGGCGCTGCTCGAGCACCTCGACGGTGAGCGGGTGCTGCGGCGCGACGGCGACCGGCACTACCCGCGGGGCGGGGCGCCATAG
PROTEIN sequence
Length: 532
GTAGHIDHGKTALVRALTGRDTDRLAEERRRGMSIELGYAELALGERRLSLVDVPGHERFVRTMIAGATGIDLFLLVVAADDGVMPQTREHLAVLRALGVDAGVVALTKVDLVDGPDRGRVAGELGELLPGAPIVAVSARSGEGIDELRARLLDVAERVDAARDAGVEGPPIGSRGALPPAVGRVAGPASQARREAAAVGGPADRDDPVLHVDRVFTVAGHGTVVTGTLWSGSLRRGDRVVVLPGGKEVRIRSIESHDCSLDVVGPRRRVALNLAGLRREEIGRGDVVTVAGTVLAPTYRLDVALDGEARAVLDERRVQVHHGTREAPARVIDLGDGTAQLRLEQPLLARRGDRVVVRRIAPPDTLGGAIVVDPAPRRHSDRSGMSVSISGCSAPKSRRASEGTGAPGPGPLARRVLGELEADGERPRTPAKLSEDLGEPRREVERAVGELVDAGTAVRLKADVVYPTAEAERLAEAVVALVAREGSTSIGEVRDALGLSRKYAQALLEHLDGERVLRRDGDRHYPRGGAP*