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scnpilot_solids1_trim150_scaffold_6393_2

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(979..2571)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis protein n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U5D0_OCEP5 similarity UNIREF
DB: UNIREF100
  • Identity: 29.2
  • Coverage: 513.0
  • Bit_score: 161
  • Evalue 1.70e-36
lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 29.2
  • Coverage: 513.0
  • Bit_score: 161
  • Evalue 5.50e-37
Tax=RBG_16_Acidobacteria_64_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 28.2
  • Coverage: 510.0
  • Bit_score: 170
  • Evalue 6.90e-39

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Taxonomy

RBG_16_Acidobacteria_64_8_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1593
ATGGAGCGAAATAGCGGATATGGAAGCCCAAGATGGGCAGATGACTCGCGGATCGACACCCGGCGATATCTCGGCGCCCTGAAGCGCAACCGCCGGCTGATCGTCGTGATCGTCGTCGTCGTCACGCTGCTCGTCCTGATCGTCTCGCTGGTCCTGCCGAAGTCCTACTCGGCCACCGCGAAGATCATCTACGACCCCGAATCGGCCCTGCTCGGCCCGCCGGACGCGGAATCGACCCAACGGCAGCTCTCGACGCTCAGCACGCTCTTCAACAGCCCGCAGCTGGAGCAGGCGGCGGCGAAGCAGGTGCCGGGGGAGACGCCGGAATCGATCCACTCCGCGATCTCGATCACGGTGGCCACCGAAGCGAACCTGCTTGAAGTCAAGGCATCCGCCGACGAAGCGGACAAGGCCGCCGAGATCGCCAACGCGGTGTCGACGAGCTTCCTTCAGCTGCAGCAGGAACAGGCGCGCGAAAAGCTGCTCGCCACCCAGGCCAGCCTCGAAGAACAGATCGAAAACGTCGGCGAAGAAAGCGAAACGGCGGAAGCCCAGGTCGAAGCCCTGCAGAACCGGATCAACCACCTGGAAGTCCAGGCGGCGACGGCCGGGGGCGAACTCCAGCTGGGACAGGAAGCGACGGCACCGAGCTCGGCCACCAGCCCCGACCCGCCGCGCAACACGCTGATCGCCCTCGTCGCCGCCATCTTCATCGCCGTGCTCGTGGCCCTGGGTCGGGACCAGCTCTCACCCGGGATCAGCGATCCGCGCGAGGTCGGGCGACTCCTGCGTACCTCGGTCCTGGCGATGATCCCGTACGTCGGCAAGCGAGCCTCGCGCAAGTCGGCCACCGCGGCGGCGATCGAGCACGAGGCCTATCAGTCGCTCAGCGCCTCGATCCAGGCCCTGCGGCCCGCGGACGGCAAGCCGCGGCTGTTGTTGCTCACCAGCGCCGTGCACGGCGAGGGCAAGTCGACCGCAAGCTCGCGGCTCGGCCGGGCGCTCGCCCAGGCGGGCCACAAAACGCTGCTCGTGTCCGGCGACGTCCGCTGGCCGGAGCTGCACAACCTCTTCCACGCGCCGCGGCAGCCGGGCATGACCGACCTGCTCGGCGAGGTCAACGCCGGCACCGATCCTCAGGAGGCGCTCGCGAGCATGGCGCGGCTGATCGACCTGCCGAAGGTGGGCGGGACCAAGGCGGCATCGCTCCACCTGTTGACCGCCGGCACCCCGACCACCGACGCGGCGACGCTCTTGGCCAGCGGCGCGACGAGCCGGTTCTTCGAATTCCTCAAGGGGTCCGACTACGACTACGTCCTGGTGGACGGGCCGCCCGCGCTTGGCGTCGCCGACATCCAGCCGCTGATGGCGGAGGCGGACGACGTCATCGCCGTCGTCCGCCTCGACCGGGTGAACGTGGCCGACATGGTCAATCTGCAGGAGGTCTTCTCGCGACTGGTCGGTGACCTGTTCGGTGTCGTCGTCGTCGGCGCCAGCGTCGATGCCTCGCCGTACTACCTCGGCGAAAAGCGGCGGGTGATGCTCGCCGGCTCGACCGTCGGCGAGGATCAGCCGAAGACGTCTAAAGATTGA
PROTEIN sequence
Length: 531
MERNSGYGSPRWADDSRIDTRRYLGALKRNRRLIVVIVVVVTLLVLIVSLVLPKSYSATAKIIYDPESALLGPPDAESTQRQLSTLSTLFNSPQLEQAAAKQVPGETPESIHSAISITVATEANLLEVKASADEADKAAEIANAVSTSFLQLQQEQAREKLLATQASLEEQIENVGEESETAEAQVEALQNRINHLEVQAATAGGELQLGQEATAPSSATSPDPPRNTLIALVAAIFIAVLVALGRDQLSPGISDPREVGRLLRTSVLAMIPYVGKRASRKSATAAAIEHEAYQSLSASIQALRPADGKPRLLLLTSAVHGEGKSTASSRLGRALAQAGHKTLLVSGDVRWPELHNLFHAPRQPGMTDLLGEVNAGTDPQEALASMARLIDLPKVGGTKAASLHLLTAGTPTTDAATLLASGATSRFFEFLKGSDYDYVLVDGPPALGVADIQPLMAEADDVIAVVRLDRVNVADMVNLQEVFSRLVGDLFGVVVVGASVDASPYYLGEKRRVMLAGSTVGEDQPKTSKD*