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scnpilot_solids1_trim150_scaffold_5302_3

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: 2591..4234

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FED5_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 48.1
  • Coverage: 559.0
  • Bit_score: 425
  • Evalue 6.70e-116
  • rbh
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 559.0
  • Bit_score: 425
  • Evalue 2.10e-116
  • rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.1
  • Coverage: 559.0
  • Bit_score: 425
  • Evalue 9.40e-116

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Taxonomy

Conexibacter woesei → Conexibacter → Solirubrobacterales → Thermoleophilia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1644
TTGGAGGCATCAGCACTCAGTCACGCCAGTCGCCGCGGGCTTCTCGCCCGTAAGTCGCCGCTGCTCAAGCTGCAGGGGGACGAGAAGCTGATCGCGATGGCCCGCAGCGGCAACCCGGGCGCCTTCGAGACGATCGTCGACCGCTACCAGGGCCGCCTGCTCGGCTTCTGCCGCCAGATGCTGGGCTCGACCGAGGACGCCGAAGACGTCCTGCAGGAGGTCTTCGTCAACGCCTACCGGGCGATGCTCGCCGACGAGCGGGAGATCAACCTGCGCCCCTGGCTCTACCGGATCGCTCGTAACCGTTGCCTCAACCACCTGCGCAAACCAAGCGCCGACGCGCAGGAATCGATGGACATGGTGCCCGAGGTGGAAGCCGCCTCGACCGCCGAGAAGGTCCACAATCGCGAGGAGTTCCGGCAGATCATCGCCGACGTCAACAAGCTGCCGGAGACGCAGCGATCGGCGCTCCTGCTGCGCGAGATGGACGCGCTCTCCTACGAGGAGATCGCCGACGCGATGGAGACGACGGTGCCGTCGGTCAAGTCGCTGCTGGTGCGGGCGCGGATCTCGCTCGCCGAGGCGAGCCAGGCGCGCCTCCTGACCTGCGGCGAGGTCCGGGTCGAGCTCTCCGAAGCGGCCGAGGGCCTGCGCAAGGTCTCGGCGCCGGTCCGCCGCCACGTGCGCGAGTGCGAGGAATGCGCCGACTTCCGCTCCCAGGTCCGCTCCAACGAGAAGCTCCTGGCGGCGCTCTTCCCGGTCCCGGTGCTGCTCGCCTTCAAGGGCTTCATCGCCGGCAAGCTCGGGCTCGGCGGCGGTTCGGCCGCGGGCAGCGCGGCGGCCTCCGGGGCCGCGGCGGGCGGCGGCGCGGCTGCCGCGGGCGGCGCGGCGAGCGGCATCGGCGCGGCGCTCGGCGGGACCGGCGCGGCGGGCGGCCTCGGTGGCCTAGGCGGCGCGATCGGCGGCGCGATCGGCACCAAGGCGGTCGCCGGCGTCGTCACCGCGGCGGTGATCACCGCGGGTGCCGCGGTCGAGCTGCCGAAGGAACACCACTCCACGGCCCCCGTGGCGCCGGTCGCGCGCGAAGTGCCCGCGCCCGCCCCGGCACTCGCCTCGACGCCCCCGAGCGGCGGGGTCGAAGCGTCGATCACGCCGGCGACGACGGTCGAAAGCGGCAAGTCGGCGATCGCCAGCAACGTGGTCGCGGTGGCGCCGAGCAAGGCCGAAGAAGCCCAGGAAACGACCACCGCAGCGCCGCCCGAAGAAGCGACGCCCGCGACCGGCACCGAAGAACAGGTCCCGCCCGGCGACGCCGAAGTGGCCGACGATCCGGAAGCAGGCGCCTCCGAGCTCGAAGCCGCCAACGTCACCGGCGGCATCGAAGTCGAGCCCGCCACCGCGGCCGGCCCGACCACGACCGCCGGCGCCCACGGCGGCAAATCGACGGTGACCGTCACCGTGGCGCCCGCGCCGACTCCGCCGGCGACCACCCCCCCTCCCGCGACCGTCACCCCGCCGCCCGCCGAACCGGCCCCGACGGGCGAAGAAGCGGCCGCACCGCCGCCTGCGGTGGAACCGGAAGTCCCGGCGATCCCGGCCGAACCGGCCGTCGAAACGCCGCCGGTCACCGAAGAAACTCCGTAG
PROTEIN sequence
Length: 548
LEASALSHASRRGLLARKSPLLKLQGDEKLIAMARSGNPGAFETIVDRYQGRLLGFCRQMLGSTEDAEDVLQEVFVNAYRAMLADEREINLRPWLYRIARNRCLNHLRKPSADAQESMDMVPEVEAASTAEKVHNREEFRQIIADVNKLPETQRSALLLREMDALSYEEIADAMETTVPSVKSLLVRARISLAEASQARLLTCGEVRVELSEAAEGLRKVSAPVRRHVRECEECADFRSQVRSNEKLLAALFPVPVLLAFKGFIAGKLGLGGGSAAGSAAASGAAAGGGAAAAGGAASGIGAALGGTGAAGGLGGLGGAIGGAIGTKAVAGVVTAAVITAGAAVELPKEHHSTAPVAPVAREVPAPAPALASTPPSGGVEASITPATTVESGKSAIASNVVAVAPSKAEEAQETTTAAPPEEATPATGTEEQVPPGDAEVADDPEAGASELEAANVTGGIEVEPATAAGPTTTAGAHGGKSTVTVTVAPAPTPPATTPPPATVTPPPAEPAPTGEEAAAPPPAVEPEVPAIPAEPAVETPPVTEETP*