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scnpilot_solids1_trim150_scaffold_9631_5

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(4172..5149)

Top 3 Functional Annotations

Value Algorithm Source
Tn4652, transposase subunit B n=3 Tax=Pseudomonas RepID=Q88IM2_PSEPK similarity UNIREF
DB: UNIREF100
  • Identity: 52.8
  • Coverage: 286.0
  • Bit_score: 303
  • Evalue 2.30e-79
Tn4652, transposase subunit B similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 286.0
  • Bit_score: 303
  • Evalue 7.20e-80
Tn4652, transposase subunit B {ECO:0000313|EMBL:AAN68585.1}; TaxID=160488 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (strain KT2440).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.8
  • Coverage: 286.0
  • Bit_score: 303
  • Evalue 3.20e-79

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Taxonomy

Pseudomonas putida → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 978
ATGTTCGTCGACGAGCATCGCTCCGACTTCGGGGTCGAGCCGATCTGCAGGGTCCTGGGGGTGTCGGCCTCCGCCCACCGCGAGCGCGCCAGGGGCCGCCGGTCGGCGCGGCAGATATCCGACGAGCGCCTCCTCGCCGAGATCAGGCGGGTCCACGCCGAGAGCCACGAGGCCTATGGGTCACGGCGGGTCTGGAAGGAGCTCGGACGCCGCGGCGAGACCGTCGCCCGTTGCACGGTCGAGCGACTGATGAGGCGGGAGGGCATCCAGGGCGCCAAGCGCCGGGGCAGGCCCTGGCGCACCACGACGCCGGATCCGGAGGGTGCGCAGAGGCCCGACCTGGTCGACCGTGACTTCACGGCGGAGCGGCCGAACGAACTCTGGGTGGCGGACTTCACCTACCTGCGCACCTGGGAGGGCATGGTCTTCTTCAGCTTCGTGATCGACGTCTTCGGCCGCAGGGTCGTCGGCTGGCGGCTGGCCCGCCACATGCGCACCGACCTCGTCACGGACGCGCTGCGGATGGCGCTCGGCCTGCGCTCCCGCGGCGCCGACGTCGCCCTCGTCCACCACTCCGACCGCGGCTCGCAATACACCTCCGCCGAGTTCACGCAGGCCCTCGACGATGCCGACGTGCTCGGCTCCCTGGGCTCGACCGGCGACGCGTACGACAACGCGATGGCCGAGTCCTTCGTCGACTCCTTCAAGACCGAGCTGATCGCCGGGCGCACCTGGCGCTCGGCCGGGCAGGCCGAGCTGGCGATCGTCGGGTGGGTCGGCTGGTTCAACCACCACCGGCTGCACTCCGCGATCGGCGACGTCCCGCCGGTCGAGTTCGAGCGGGACCACCGGGAGCGGGCAGACGACGAGCCGCCGCCCCGCTCCTCTCGCCCTACGGGCTCGCCTCGCGGGGCGGCGGGCGAGCACCCTGGACCTCCACCGGATAGCGTCAACCTGCAGGTCGTCCGATCCACATAA
PROTEIN sequence
Length: 326
MFVDEHRSDFGVEPICRVLGVSASAHRERARGRRSARQISDERLLAEIRRVHAESHEAYGSRRVWKELGRRGETVARCTVERLMRREGIQGAKRRGRPWRTTTPDPEGAQRPDLVDRDFTAERPNELWVADFTYLRTWEGMVFFSFVIDVFGRRVVGWRLARHMRTDLVTDALRMALGLRSRGADVALVHHSDRGSQYTSAEFTQALDDADVLGSLGSTGDAYDNAMAESFVDSFKTELIAGRTWRSAGQAELAIVGWVGWFNHHRLHSAIGDVPPVEFERDHRERADDEPPPRSSRPTGSPRGAAGEHPGPPPDSVNLQVVRST*