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scnpilot_solids1_trim150_scaffold_6966_6

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: 3186..3638

Top 3 Functional Annotations

Value Algorithm Source
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; K01770 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] similarity KEGG
DB: KEGG
  • Identity: 56.9
  • Coverage: 153.0
  • Bit_score: 174
  • Evalue 2.30e-41
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 2750 similarity UNIPROT
DB: UniProtKB
  • Identity: 56.9
  • Coverage: 153.0
  • Bit_score: 174
  • Evalue 1.00e-40
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L112_THERP similarity UNIREF
DB: UNIREF100
  • Identity: 56.9
  • Coverage: 153.0
  • Bit_score: 174
  • Evalue 7.40e-41

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Taxonomy

Thermomicrobium roseum → Thermomicrobium → Thermomicrobiales → Thermomicrobia → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 453
GTGGTCGGCATCGGCTACGACTCCCACCGCTTCGCCACGGGGCGCAAGCTGATCCTCGGTGGAGTGGAGGTCGACCACCCGCAGGGCCTCGAAGGCCACTCCGACGCCGATGTCGTCACCCACGCGGTGATCGACGCGATCCTCGGTGCCGCCGGCGGGGGCGACATCGGCACCCTCTTCCCGCCCGACGAGGAGCGCTGGCGCGACGCCGCCTCGATCGACCTCCTGCGCACCGCGATCGGCACGATCGCCGGCCGGGTCGTCAATGTCGACGCGACGGTGATCTGCGAGGCGCCGAAGCTCGCCCCCTACAAGCCACAGATGGAAGCGCTGCTGGGCGAGGTCACCTCGGCCAAGGTCAGCGTCAAGGCGACGACCAACGAGGGCATGGGCTGGATCGGCCGCGGCGAGGGCATCGCCTGCATCGCCGTCGCCCAGGTCGAGGACGACTGA
PROTEIN sequence
Length: 151
VVGIGYDSHRFATGRKLILGGVEVDHPQGLEGHSDADVVTHAVIDAILGAAGGGDIGTLFPPDEERWRDAASIDLLRTAIGTIAGRVVNVDATVICEAPKLAPYKPQMEALLGEVTSAKVSVKATTNEGMGWIGRGEGIACIAVAQVEDD*