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scnpilot_solids1_trim150_scaffold_235

Search features with annotation key words

Displaying items 31-60 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_235_31
Gillisia limnaea, Gillisia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

36278..37072
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BSU2_9FLAO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHQ01472.1}; Flags: Precursor;; TaxID=865937 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gillisia.;" source="Gillisia limnaea DSM 15749.;"
scnpilot_solids1_trim150_scaffold_235_32
Asticcacaulis sp. AC460, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37270..38142
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00037292ED
Uncharacterized protein {ECO:0000313|EMBL:ESQ86899.1}; TaxID=1282360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC460.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_235_33
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

38232..39467
DNA (1236bp) protein (412aa)
NHL repeat containing protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y2G9_PEDHD
NHL repeat containing protein {ECO:0000313|EMBL:AHM61628.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
NHL repeat containing protein
scnpilot_solids1_trim150_scaffold_235_34
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

40296..43637
DNA (3342bp) protein (1114aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035D1E9C
Uncharacterized protein {ECO:0000313|EMBL:KGE86489.1}; Flags: Fragment;; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_235_35
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

43923..44321
DNA (399bp) protein (133aa)
Uncharacterized protein {ECO:0000313|EMBL:KIA87638.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
scnpilot_solids1_trim150_scaffold_235_36
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

Not on your lists

comp(44873..45820)
DNA (948bp) protein (316aa)
cyclic pyranopterin monophosphate synthase subunit MoaC (EC:4.1.99.18)
Molybdenum cofactor biosynthesis protein C n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NPN3_9BACT rbh
Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
scnpilot_solids1_trim150_scaffold_235_37
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(45824..46267)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000348AD1A
molybdopterin converting factor, large subunit
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids1_trim150_scaffold_235_38
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(46273..47418)
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037E9C41
Contig8, whole genome shotgun sequence {ECO:0000313|EMBL:KIO78603.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
UBA/THIF-type NAD/FAD binding protein; K11996 adenylyltransferase and sulfurtransferase rbh
scnpilot_solids1_trim150_scaffold_235_39
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(47424..47657)
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036C54D0
sulfur carrier protein ThiS; K03636 molybdopterin synthase sulfur carrier subunit
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids1_trim150_scaffold_235_40
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(47647..48180)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000345148C
formate dehydrogenase family accessory protein FdhD; K02379 FdhD protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids1_trim150_scaffold_235_41
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(48262..48993)
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003771F84
hypothetical protein; K07090
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids1_trim150_scaffold_235_42
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(49028..50203)
DNA (1176bp) protein (392aa)
molybdopterin molybdochelatase; K03750 molybdopterin molybdotransferase [EC:2.10.1.1]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037B0A6E rbh
Molybdopterin binding domain {ECO:0000313|EMBL:EDM38064.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
scnpilot_solids1_trim150_scaffold_235_43
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(50216..51199)
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI0003625944
GTP cyclohydrolase subunit MoaA; K03639 molybdenum cofactor biosynthesis protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids1_trim150_scaffold_235_44

Not on your lists

comp(51201..51920)
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B56CD6
Marine sediment metagenome DNA, contig: S01H1_L00858 {ECO:0000313|EMBL:GAF71195.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_solids1_trim150_scaffold_235_45
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(52027..53130)
DNA (1104bp) protein (368aa)
Putative C4-dicarboxylate transporter protein n=1 Tax=planctomycete KSU-1 RepID=I3IQE6_9PLAN
Putative C4-dicarboxylate transporter {ECO:0000313|EMBL:GAN31553.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_235_46
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53187..54710)
DNA (1524bp) protein (508aa)
Major facilitator superfamily MFS_1 n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3EAB0_GEOLS
major facilitator superfamily protein; K02575 MFS transporter, NNP family, nitrate/nitrite transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACD93938.1}; TaxID=398767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
scnpilot_solids1_trim150_scaffold_235_47
unknown

Not on your lists

comp(54802..55251)
DNA (450bp) protein (150aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_235_48
RifOxyB12_full_OP3_50_7_curated, Omnitrophica, Bacteria

Not on your lists

comp(55843..56628)
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B5876F
narJ; protein necessary for nitrate reductase assembly (narJ)
Tax=RifOxyB12_full_OP3_50_7_curated
scnpilot_solids1_trim150_scaffold_235_49
GWA2_WOR_2_45_18_curated, WOR-2, Bacteria

Not on your lists

comp(56682..57347)
DNA (666bp) protein (222aa)
nitrate reductase subunit beta (EC:1.7.99.4); K15906 nitrite oxidoreductase beta subunit
nitrate reductase A subunit beta n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B552A0
Tax=GWA2_WOR_2_45_18_curated
scnpilot_solids1_trim150_scaffold_235_50
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57311..57985)
DNA (675bp) protein (225aa)
nitrate reductase subunit beta; K00371 nitrate reductase 1, beta subunit [EC:1.7.99.4]
nitrate reductase A subunit beta n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B552A0
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
scnpilot_solids1_trim150_scaffold_235_51
RLO_Deltaproteobacteria_40_28, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58032..61649)
DNA (3618bp) protein (1206aa)
nitrate oxidoreductase subunit alpha; K00370 nitrate reductase 1, alpha subunit [EC:1.7.99.4]
Nitrate reductase (Alpha subunit) id=3956809 bin=GWF2_Ignavibacteria_35_20 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria rbh
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_40_28_curated
scnpilot_solids1_trim150_scaffold_235_52
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61706..62539)
DNA (834bp) protein (278aa)
Cytochrome c class I id=4321561 bin=GWF2_Bacteroidetes_41_31 species=Ferroglobus placidus genus=Ferroglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
cytochrome c, class I
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
scnpilot_solids1_trim150_scaffold_235_53
unknown

Not on your lists

comp(62674..62892)
DNA (219bp) protein (73aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_235_54
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

comp(62903..63604)
DNA (702bp) protein (234aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PII7_CHIPD
Crp/Fnr family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
scnpilot_solids1_trim150_scaffold_235_55
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

63833..64480
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000372B69E
Uncharacterized protein {ECO:0000313|EMBL:KIC96170.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_235_56
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

64679..66208
DNA (1530bp) protein (510aa)
hypothetical protein n=1 Tax=Lewinella persica RepID=UPI00035F8EE1 rbh
Dehydrogenase {ECO:0000313|EMBL:KFF14788.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
gMC oxidoreductase rbh
scnpilot_solids1_trim150_scaffold_235_57
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

66208..67266
DNA (1059bp) protein (353aa)
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8L1F5_PARAV
Uncharacterized protein {ECO:0000313|EMBL:KFF14789.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_235_58
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(67300..68412)
DNA (1113bp) protein (371aa)
Cl-channel voltage-gated family protein n=1 Tax=Pontibacter sp. BAB1700 RepID=J0V9Q4_9BACT
Cl-channel voltage-gated family protein {ECO:0000313|EMBL:EJF10902.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
cl-channel voltage-gated family protein
scnpilot_solids1_trim150_scaffold_235_59
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(68595..69398)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KX06_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD08335.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids1_trim150_scaffold_235_60
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(69617..69901)
DNA (285bp) protein (95aa)
dnaB; primary replicative DNA helicase (EC:3.6.1.-); K02314 replicative DNA helicase [EC:3.6.4.12]
DNA helicase n=1 Tax=Niabella aurantiaca RepID=UPI000363298C
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 31-60 of 60 in total

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