ggKbase home page

scnpilot_solids1_trim150_scaffold_426_5

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_40_703

near complete RP 49 / 55 MC: 2 BSCG 49 / 51 MC: 1 ASCG 12 / 38
Location: comp(2088..6380)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000256|RuleBase:RU004279};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.3
  • Coverage: 999.99
  • Bit_score: 2389
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 82.5
  • Coverage: 999.99
  • Bit_score: 2375
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Segetibacter koreensis RepID=UPI0003677F0A similarity UNIREF
DB: UNIREF100
  • Identity: 85.6
  • Coverage: 999.99
  • Bit_score: 2454
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 4293
ATGAATAGAAAAGAAAATCGCCCAAAGGCAACATTTTCTCAAATAACAATCGGTTTAGCCTCACCTGATTCTATTCTTGAAAGAAGTCATGGAGAAGTATTAAAACCGGAAACAATCAATTACCGTACTTATAAACCCGAACGGGATGGATTGTTTTGCGAACGGATTTTCGGGCCGGTAAAAGATTATGAATGTGCATGCGGCAAATACAAACGTATCCGTTACAAGGGAATTGTGTGTGACCGTTGTGGTGTGGAAGTTACCGAAAAGAAAGTACGCCGTGAAAGAATGGGCCACATCAAACTGGTGGTTCCGGTTGTACACATCTGGTATTTCAAATCACTGCCGAATAAAATCGGATATATGCTGGGGATGAGTTCCAAAAAACTGGAATCCATCATCTATTATGAAAGATATGTGGTTATTCAGCCGGGTGTGCGTGTTGACAAAGGCCAGAATGAAGGAGACCTTCTTACAGAAGAAGAATACCTCGATATTCTGGATACGCTTCCCAAAGACAATCAGTATTTGCAGGATGAAGATCCCAACAAGTTTATTGCCAAGATGGGAGCCGAAGCAGTTCAGGATATGCTGGCAAGAATTGATTTGGATCGTTTGTCGGAAGACCTGCGCGATGCAGCGGCGAATGAAACTTCTCAGCAGCGTAAAGCAGATGCTTTAAAACGTCTCAGCGTTGTTGAAGGTTTTAAAGATGCCAATACCCGCATCACCAACAGGCCCGAATGGATGGTAATGCAATACATTCCTGTGATACCTCCGGAACTTCGTCCGTTGGTACCGTTGGATGGCGGTCGTTTTGCTTCGTCAGATCTGAATGACTTGTACCGTCGTGTTATCATTCGCAACAATCGTTTGAAACGCTTACTGGAAATCAAGGCTCCTGAAGTGATTCTCAGAAATGAAAAGAGAATGTTGCAGGAAGCCGTGGATTCCCTGTTTGATAACTCACGTAAATCAAATGCTGTTAAAGCCGAAGGTGGACGAGCATTGAAATCGCTGAGTGATGTGTTGAAAGGGAAACAGGGACGTTTCCGTCAGAACCTGTTGGGTAAACGTGTGGATTATTCCGGACGTTCTGTAATTGTGGTTGGCCCTGAATTGAAGATGCATGAATGTGGATTGCCGAAGGATATGGCTGCCGAACTTTTCAAACCCTTTATCATCAGGAAACTAATTGAAAGAGGAATTGTAAAGACGGTGAAGAGTGCGCGCAAATTGGTTGACAAAAAGGAATCCATTATTTGGGATATCCTTGAAAATATTTTAAAAGGCCATCCGGTATTGCTCAATCGTGCCCCGACATTGCACAGACTTTCGATACAGGCATTCCAGCCCAAGTTGATTGAAGGAAAAGCAATTCAATTGCACCCGTTGGTAACAACGGCTTTCAATGCCGACTTTGATGGTGACCAAATGGCGGTGCATGTACCATTGAGCAGTGCTGCAATTTTGGAAGCACAGTTGCTGATGCTTGCATCTCACAACATTTTGAATCCGCAGAATGGTACTCCGATTACACTTCCTACCCAGGACATGGTTTTGGGATTATATTATATTACCAAAGGAAGAAAATCTACCAAGGATGTCCATGTGAAGGGAGAAGGAATGGCATTTTATTCTCCGGAAGAAGTAATCATTGCTTTCAATGAAAAGCAAGTGGATCTGCACGCATCCATTAAGGTGAAGACTATTGTTCGAACTGACAAAGGCGAATTGGTCAATAAGCTGGTGGATACCACTGTCGGGCGTGTGATTTTTAACCAGGCAGTTCCTAAAGAAGCCGGGTATATCAATACCCTGATTACGAAGAAAACATTGCGTGAAATCATTGGTGATATTATTAAATGGACAGATGTACCAACAACTGAAAAATTCCTGGATGCTATTAAACAGTTAGGTTTCAGAATGGCTTATAAAGGTGGATTGTCATTTAGTATTAACGACCTGATTATCCCGGATGAAAAGAAACAATTGATTGAAGATGCTTCCAATGAAGTAGATGAGGTTTGGGAAAACTATAATGCAGGTCTGATTACAAATAATGAACGTTATAACGGAATCATTGACATCTGGAGCCGTGTGGATACCAGGTTGACGGAAACTTTGATCCGTGAACTGGCAGCAGATAAACAGGGATTCAATTCTGTTTACATGATGCTCGACTCCGGAGCCCGTGGTTCTAAACAACAGATCAAGCAGCTTGCAGGAATCAGGGGATTGATGGCAAAACCACGTAAATCAGGAAGTACCGGAAGTGAAATCATTGAAAACCCGATTCTTTCCAATTTCAAAGACGGATTGAATGTGTTGGAATATTTTATTTCTACACACGGTGCACGTAAAGGACTTGCAGATACTGCATTGAAAACAGCGGATGCCGGATATCTTACCAGAAGGCTGGTTGATGTTGCCCAGGATGTTGTAATTAATGAAGAAGATTGTGGCACATTGAGAGGCATCGCCACATCGGCACTGAAAGATAATGACGATATCGTAGAACCGTTGTACGACAGGATTACGGGACGTACTTCCCTGCACGATGTGTATAACCCGGTTACAGACGAATTGATAGTTCCGGCAGGCGAATTGATTACCGAAGAAATTGCCCACGCCATTCAGGATGCGGGTATTGAAACCGTGGAAATCCGTTCTGTTCTAACCTGCGAAAGCCACCATGGTGTTTGCTCCAAGTGTTACGGACAAAACCTGGCTTCCGGATATGTGGCACAGAAAGGCGATGCAGTAGGAATCATTGCTGCCCAGTCGATTGGTGAGCCGGGAACACAGCTTACCCTGCGTACATTCCACGTTGGTGGTGTTGCGGGTTCTGCTTCAGTTGAATCTTCACTTTCAGCTAAGTTTGATGGTGTCATCCATTTTGATGGATTGCGTACTGTAGATTCTAAAAATAATGATGGCGACCCGGTTAAGGTTGTAATCGGCCGTACGGGTGAAGTAAGAATTGTAGATCCTAAAAATGATCATTTGTTGGTTACCAATAATGTTCCTTATGGTTCAATGGTAAATGTAAAAGATGGTCAGACAGTAGCGAAAGGTGATGTGATTTGTTCGTGGGATCCGTTCAATAACGTAATTGTTTCGGAAATAGAAGGAACAGTCGTTTTAGAAAATGTTATTGAAGGAATTACCTGCCGTGAAGAAGCCGATGAACAGACAGGGCATACTGAAAAAATAATTATTGAAACCAAGGATAAAGCACGTATCCCTGTTCTGGTAATCAAGGGTAAAAAAGATTCCAAGACTTACAACCTGCCGGCAGGATCACACGTGACATTGCATGATGGTGATAAGGTGATTACCGGCCAGGTGGTTGCCAAGATTCCACGTGTTTTAGGAAAACTTCGCGATATCACAGGTGGTTTGCCAAGAGTTACGGAATTGTTTGAAGCGAGAAACCCGGCAAATCCTGCTGTTGTATCAGCCATTGATGGTGTGGTTTCATTTGGAAATATCAAGAGAGGTAACAGAGAAATTGTGATAGAAGCCAAAGACGGTGTGGTTAAGAAATATCTTGTGCCTCTTACACGTCAGATCCTGGCCCAGGAAGGCGACTTTGTGAAAGCCGGAGCTGCATTGAGTGATGGCCAGATTTCGCCGGCAGATATCCTTCAGATCAAGGGACCTCATGCAGTACAGGAATATGTGGTAAATGAGATACAGGAAGTGTACAGGCTCCAGGGTGTAAAAATCAATGATAAGCACATTGAAACCATTGTAAGGCAAATGATGCGTAAGGTTACCATTGAAGATGCCGGAGATACCAAATTCCTTGAAGGCGATACCGAAGACCGTATCGATTTTAATGCAGAGAATGATTTCATCTTTGATAAAAAAGTGGTAACTGATCCGGGTGAAAGCACTAAAATGCGCGCAGGTAAGATTGCCACGCTCCGCGAATTGCGGGAAGAAAACAGTTTGCTGCGCCGTGCTGATAAGAAGTTGGTTCAATTCAGGGATGCACAACCCGCCACCTCTTCTCCCCTTCTGCTTGGAATTACCAAAGCTTCATTGGGAACTCAAAGCTGGATTTCCGCTGCATCATTCCAGGAAACTACCAAAGTGTTGTCATCGGCAGCCATTCAGGGCAAAACAGACGGAATGCTTGGTTTGAAGGAAAACGTGATTACGGGTCATCCGATTCCTGCAGGTACAGGATTGCGTGATTTTGAAAATATGATTGTGGGCAGTAAGGAAGAATATGAATTGCTGAAAACTGCAAAGGAGGCCATGGCCTTTGATGAAGATGAATAA
PROTEIN sequence
Length: 1431
MNRKENRPKATFSQITIGLASPDSILERSHGEVLKPETINYRTYKPERDGLFCERIFGPVKDYECACGKYKRIRYKGIVCDRCGVEVTEKKVRRERMGHIKLVVPVVHIWYFKSLPNKIGYMLGMSSKKLESIIYYERYVVIQPGVRVDKGQNEGDLLTEEEYLDILDTLPKDNQYLQDEDPNKFIAKMGAEAVQDMLARIDLDRLSEDLRDAAANETSQQRKADALKRLSVVEGFKDANTRITNRPEWMVMQYIPVIPPELRPLVPLDGGRFASSDLNDLYRRVIIRNNRLKRLLEIKAPEVILRNEKRMLQEAVDSLFDNSRKSNAVKAEGGRALKSLSDVLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKMHECGLPKDMAAELFKPFIIRKLIERGIVKTVKSARKLVDKKESIIWDILENILKGHPVLLNRAPTLHRLSIQAFQPKLIEGKAIQLHPLVTTAFNADFDGDQMAVHVPLSSAAILEAQLLMLASHNILNPQNGTPITLPTQDMVLGLYYITKGRKSTKDVHVKGEGMAFYSPEEVIIAFNEKQVDLHASIKVKTIVRTDKGELVNKLVDTTVGRVIFNQAVPKEAGYINTLITKKTLREIIGDIIKWTDVPTTEKFLDAIKQLGFRMAYKGGLSFSINDLIIPDEKKQLIEDASNEVDEVWENYNAGLITNNERYNGIIDIWSRVDTRLTETLIRELAADKQGFNSVYMMLDSGARGSKQQIKQLAGIRGLMAKPRKSGSTGSEIIENPILSNFKDGLNVLEYFISTHGARKGLADTALKTADAGYLTRRLVDVAQDVVINEEDCGTLRGIATSALKDNDDIVEPLYDRITGRTSLHDVYNPVTDELIVPAGELITEEIAHAIQDAGIETVEIRSVLTCESHHGVCSKCYGQNLASGYVAQKGDAVGIIAAQSIGEPGTQLTLRTFHVGGVAGSASVESSLSAKFDGVIHFDGLRTVDSKNNDGDPVKVVIGRTGEVRIVDPKNDHLLVTNNVPYGSMVNVKDGQTVAKGDVICSWDPFNNVIVSEIEGTVVLENVIEGITCREEADEQTGHTEKIIIETKDKARIPVLVIKGKKDSKTYNLPAGSHVTLHDGDKVITGQVVAKIPRVLGKLRDITGGLPRVTELFEARNPANPAVVSAIDGVVSFGNIKRGNREIVIEAKDGVVKKYLVPLTRQILAQEGDFVKAGAALSDGQISPADILQIKGPHAVQEYVVNEIQEVYRLQGVKINDKHIETIVRQMMRKVTIEDAGDTKFLEGDTEDRIDFNAENDFIFDKKVVTDPGESTKMRAGKIATLRELREENSLLRRADKKLVQFRDAQPATSSPLLLGITKASLGTQSWISAASFQETTKVLSSAAIQGKTDGMLGLKENVITGHPIPAGTGLRDFENMIVGSKEEYELLKTAKEAMAFDEDE*