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scnpilot_solids1_trim150_scaffold_293_6

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_40_703

near complete RP 49 / 55 MC: 2 BSCG 49 / 51 MC: 1 ASCG 12 / 38
Location: comp(8963..9832)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 70 subunit, RpoD subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQK7_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 72.7
  • Coverage: 289.0
  • Bit_score: 413
  • Evalue 1.80e-112
RNA polymerase sigma factor rpoD {ECO:0000313|EMBL:KIC95338.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.0
  • Coverage: 289.0
  • Bit_score: 420
  • Evalue 2.10e-114
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 72.7
  • Coverage: 289.0
  • Bit_score: 413
  • Evalue 5.70e-113

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Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 870
ATGCGTCAGTTAAAGATTACCAAGTCTATCACCAACAGGGAAAGTGAGAGTCTGGAAAAATACCTGCAGGAAATCGGGAAGGTGGACTTGATAACTCCTGAGGAGGAAGTTCATCTTGCAGAGTTAATAAAACTGGGTGACCAGAAAGCTTTGGACAAACTGACAAAAGCAAATCTCAGGTTTGTTGTTTCTGTTGCCAAACAATACCAAAATCAGGGTCTCACATTACCCGATTTAATCAATGAGGGAAACCTCGGACTGATTAAAGCCGCCCGCAGATTTGACGAAACCAAAGGTTTTAAATTTATTTCTTATGCTGTCTGGTGGATACGTCAGAGTATTATGCAGGCCCTTGCAGAAAATGCAAGAATTGTAAGATTGCCTTTGAACAAAGTTGGATTAACTGCGAGAATCAGCAAAGCTTATTCTCATCTGGAACAGGAACTGGAACGACCTCCCTCACCGGATGAAATTGCAGCTTATCTCGGTGCAGATGTGGAGGAAGTCACAGCCACAATGAATCTTTCATCAAGACACGTAAGTATGGATTCGCCTCTCGGAGATGGAGATGACAATACACTGGTGGACGTAATGGAAAACAAAAATGCGGAAAGTGTCGACAAGAAAATGGATTTTTCAGAAAGCCTTACCTACGAAATTGAAAGATCTCTCGCTGTGCTCACGCCACGGCAGCGCGAAGTTATTTGCCTTGTTTTCGGAATCGGTGGAATCGATCCGATGGGGCTGGAAGAGATTGGAGAAAAATACATGCTTACCAGAGAACGTGTAAGGCAGATCAAAGATAAAGCTCTTGAAAAGCTGAGAACCATTTCCCAAAACACATCATTGAGGGAATTCATGGGAACATAG
PROTEIN sequence
Length: 290
MRQLKITKSITNRESESLEKYLQEIGKVDLITPEEEVHLAELIKLGDQKALDKLTKANLRFVVSVAKQYQNQGLTLPDLINEGNLGLIKAARRFDETKGFKFISYAVWWIRQSIMQALAENARIVRLPLNKVGLTARISKAYSHLEQELERPPSPDEIAAYLGADVEEVTATMNLSSRHVSMDSPLGDGDDNTLVDVMENKNAESVDKKMDFSESLTYEIERSLAVLTPRQREVICLVFGIGGIDPMGLEEIGEKYMLTRERVRQIKDKALEKLRTISQNTSLREFMGT*