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scnpilot_solids1_trim150_scaffold_302_18

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_40_703

near complete RP 49 / 55 MC: 2 BSCG 49 / 51 MC: 1 ASCG 12 / 38
Location: comp(13613..14182)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8S8_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 189.0
  • Bit_score: 225
  • Evalue 3.50e-56
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 189.0
  • Bit_score: 225
  • Evalue 1.10e-56
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 189.0
  • Bit_score: 225
  • Evalue 5.00e-56

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 570
TTGGAAGAGATTGAACTTGTCAGGCTTCTGCAGAACGGGGATAGAGCAGCGTTTAAAACGCTGGTTACGCGGTGGCAGGATATGGTGTATAATACCGCACTCGGATTGATGCAAAATGAAAGTGATGCAGAGGATGTGGCGCAGGAAGTGTTTGTAAAGGTTTTTGAAGCTGTAAATAGTTTTAAAGGAGAATCCAAACTTTCTACCTGGCTTTACCAGATCACAATTCGCAAATCACTGGATGCCCTCAGAAAGAAAAAACGAAAAAAAAGATTCAGCTTTATTTACAGCCTTTACAATGAAAATGATGAATTGATTCACGACCCGCCAGACTTTGTTCATCCGGGTGTAATGGCCGAAAACAAAGAAGATGCAGAATGGTTGTTTAAAGCAGTGAAGAGATTGCCTGAAAATCAAAAGACAGCTTTCATCCTGAACAAAATGGAAACCCTGAGTTACAATGAAGTGGGAGAAATCATGAACTTAAGTACAAATGCAGTGGATGCCTTACTTCAACGGGCAAAGAAAAACTTAAAGAAATATCTTAGCGATCTTTTAAAAGAACAATGA
PROTEIN sequence
Length: 190
LEEIELVRLLQNGDRAAFKTLVTRWQDMVYNTALGLMQNESDAEDVAQEVFVKVFEAVNSFKGESKLSTWLYQITIRKSLDALRKKKRKKRFSFIYSLYNENDELIHDPPDFVHPGVMAENKEDAEWLFKAVKRLPENQKTAFILNKMETLSYNEVGEIMNLSTNAVDALLQRAKKNLKKYLSDLLKEQ*