ggKbase home page

scnpilot_solids1_trim150_scaffold_1523_8

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_40_703

near complete RP 49 / 55 MC: 2 BSCG 49 / 51 MC: 1 ASCG 12 / 38
Location: comp(10582..11142)

Top 3 Functional Annotations

Value Algorithm Source
RNase III regulator YmdB n=1 Tax=Leptospira interrogans str. L1207 RepID=M6MG36_LEPIR similarity UNIREF
DB: UNIREF100
  • Identity: 55.1
  • Coverage: 176.0
  • Bit_score: 199
  • Evalue 2.70e-48
Uncharacterized protein {ECO:0000313|EMBL:KIC95348.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.2
  • Coverage: 164.0
  • Bit_score: 210
  • Evalue 1.60e-51
Macro domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 176.0
  • Bit_score: 198
  • Evalue 1.90e-48

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 561
ATGGAACAAAAAGAAGACCTGTCAGACAGGATTTGGATTGAAAAGGGAGATATCACACAACTCAGGTTTAAGGTCGGAGCCATTGTCAATGCCGCCAATAGTTCACTGATGGGAGGCGGAGGTGTGGATGGCGCAATACATCGCGCCGGTGGCCCGGACATTATCAGGGAATGCAGTATGATTATCGAAGAAGATGGTCCGTGCCCGACCGGGCAGGCTGTCATAACTGCCGCCGGAAATCTTCAGGCCAGGTTTGTCATTCATGCAGTAGGACCGGTTTGGCAGGGAGGAAAAAATAATGAAGCACAGGACCTGACCAACTGTTACAGAAACTCCCTTCTCATTTCAAGAAAATATATGCTCAGGAGAATTGCTTTTCCCAACATCAGCACCGGCGCATATCATTATCCCAAAGATGAAGCGGCCGCCATTGCTGTCCACACAACCATAGATTTTTTATTGGAAAACGAATACCCGCTTGCCGTCATTTTTTGCTGTTTCGACGATGAGAATTACAACTGGACCAAATACTACCTCGACAACTATCTGAAACAGGCCTGA
PROTEIN sequence
Length: 187
MEQKEDLSDRIWIEKGDITQLRFKVGAIVNAANSSLMGGGGVDGAIHRAGGPDIIRECSMIIEEDGPCPTGQAVITAAGNLQARFVIHAVGPVWQGGKNNEAQDLTNCYRNSLLISRKYMLRRIAFPNISTGAYHYPKDEAAAIAVHTTIDFLLENEYPLAVIFCCFDDENYNWTKYYLDNYLKQA*