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scnpilot_solids1_trim150_scaffold_1523_14

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_40_703

near complete RP 49 / 55 MC: 2 BSCG 49 / 51 MC: 1 ASCG 12 / 38
Location: 16598..16948

Top 3 Functional Annotations

Value Algorithm Source
single-stranded DNA-binding protein n=1 Tax=Niabella aurantiaca RepID=UPI00036B5C1B similarity UNIREF
DB: UNIREF100
  • Identity: 54.4
  • Coverage: 114.0
  • Bit_score: 136
  • Evalue 1.70e-29
single-strand binding protein; K03111 single-strand DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 56.4
  • Coverage: 110.0
  • Bit_score: 136
  • Evalue 5.50e-30
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.4
  • Coverage: 110.0
  • Bit_score: 136
  • Evalue 2.40e-29

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Taxonomy

Runella slithyformis → Runella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 351
ATGCGGGGAATCAACAAAGTCATCTTGCTGGGAAATGCGGGAAAAGATCCGGAATTCAAAACACTGAACGATGGGACAACCGTGGCCCGGTTCAGCCTTGCCACAACAGACTATTTTACGCTGAAAAACGGAGAGGCCGGTTCAAAAACAGAATGGCATACCATAGTTGCCTGGAAGAGCCTGGCGAATCTCATTCAGAAATATGTACGAAAAGGCAGCCTGCTGTATATAGAAGGCAAACTGAGCTACCGGCAATATGAGGACAAAGACGGGAGGAAAATGAATATTACGGAGATAGTTGTCGAAAATATTGTGTTGCTTGACAAAAAGAATACCGGGGTAGAAGAGTGA
PROTEIN sequence
Length: 117
MRGINKVILLGNAGKDPEFKTLNDGTTVARFSLATTDYFTLKNGEAGSKTEWHTIVAWKSLANLIQKYVRKGSLLYIEGKLSYRQYEDKDGRKMNITEIVVENIVLLDKKNTGVEE*