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scnpilot_solids1_trim150_scaffold_1106_28

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_40_703

near complete RP 49 / 55 MC: 2 BSCG 49 / 51 MC: 1 ASCG 12 / 38
Location: 28779..29435

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU72_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 65.0
  • Coverage: 220.0
  • Bit_score: 293
  • Evalue 2.10e-76
50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 similarity KEGG
DB: KEGG
  • Identity: 65.0
  • Coverage: 220.0
  • Bit_score: 293
  • Evalue 6.50e-77
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.0
  • Coverage: 220.0
  • Bit_score: 293
  • Evalue 2.90e-76

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 657
ATGCAAATAGACGTCTTTAATATTGAAGGAAAGAAAACCGGCAGATCAGTAGAATTGCCGGACGAGATATTCGCCGCAGAACCAAATAACCACGTGGTTTGGCTGGCTGTGAAACAATATCTGGCTGCTCAGCGTCAGGGTACTCACAAGACCAAAGGGCGTTCAGAAGTACAGGGGAGCAGCAGAAAATTGCATAAGCAAAAGGGAACCGGCGGCAGCCGTAAAGGAAACATCCGCAACCCTCTTTACAAAGGTGGTGGTACCATTTTTGGCCCCAAACCTCACAAGTATCAATTGAAGGTAAACCGGAAAGTAAAAGACCTGGCGCGTATCGGTGCACTAAGCAGCAAGGCTACTGCCGGAAAAATCTGGATTTTGGAAGATGCCTGCATAGAAATGGAGAAGCCATCAACAAAAAATTTCACAGGTATCCTGAACAGCCTGAATACAAATACGCGGAATTTATTATTTGTTATGCCGGAATTCAATGAAAATGTTTGTAAGAGTATCCGGAATGTACCCAGTGTTTTCGGTACAGTGTTGAGTGATGTACACACCTACGATATTTTAAATGCTGATGGCCTGGTGCTTACAGAGGCGGCTGCAAAAATATTTTCAACTGAAGAAGTTGCGGGTGATGAACCAGTAAAAGCATAA
PROTEIN sequence
Length: 219
MQIDVFNIEGKKTGRSVELPDEIFAAEPNNHVVWLAVKQYLAAQRQGTHKTKGRSEVQGSSRKLHKQKGTGGSRKGNIRNPLYKGGGTIFGPKPHKYQLKVNRKVKDLARIGALSSKATAGKIWILEDACIEMEKPSTKNFTGILNSLNTNTRNLLFVMPEFNENVCKSIRNVPSVFGTVLSDVHTYDILNADGLVLTEAAAKIFSTEEVAGDEPVKA*